| Protein: | clp-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 790 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clp-6.
| Description | E-value | Query Range |
Subject Range |
|
|
680.0 | [0..122] | [746..20] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MSDEEVLNNE DEQEENINNN NLPSIVKEFV SDYTGSIWDE LLRQLTALIP RDSSGRGLTN 60
61 IFSSGALESL VGNLISNASH EFFGVNSENG EIIGALAGNA MFNLGGENNS LSSIGKVVL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [120-790] |
1 11 21 31 41 51
| | | | | |
1 DNIVSGKFKR ECHSYVPLKC QPLYFYEERQ KCLDENRLFE DPQFPANNSS IYYKKPPKSH 60
61 IVWLRPAKIF ANPRLIVNGK SRFDVRQGSL GNCWFLAAAA TLAQRDELFY RVVPPDQSFT 120
121 ENYAGIFHFQ FWRYGEWVDV VIDDRLPTVN GKLIYMSSQD GDECWGPLLE KAYAKLYGTY 180
181 EHLDGGTTTE ALEDFTGGLT EFYDLTSTDK TMILAMIMKG MQMGSLFACS IDPDPREKEA 240
241 QLANGLVRGH AYSVTGVHTV ETDKEKVALL RIRNPWGDTE WNGDWSDKSS LWEQVDQEQR 300
301 EKMEFRIKED GEFWMCLDDF MAQFANLDCC NLSADVMHEI TEMTEIEVME KQSKQWIQKS 360
361 ADGEWCSRKG TAGGCSNNEN TFCTNPQYET YFRATSPSSN DKCTVIAAVF QKYRRNQLHR 420
421 GLDMLQIGLS VYKMSGPNEK VTAEMMKTHA PIASTKLFVD YREAVVRFTV PPGYYVIVPC 480
481 TFEPNHDAEF LLRTFSNVEF DKTDMHFIWK SAVFLCALLA INFPLTKSSI DLHSHEKVQI 540
541 SINNTSGPRK QVRIRFPEFI ISGHIFCNGA PKRWLHPQLS TPKNPDEYFN IVTTDAAGMY 600
601 FLTTGNHFDL DRSVIITVLH QCEMKHLHPE PCALPYYKTV IPFNSTSSST TYIRRDLELS 660
661 KMEAFSSTHC L
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1qxpA |
| Description: | Crystal Structure of a mu-like calpain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.28868056127375 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 3.05412701733177 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.01472402774099 | bayes_pls_golite062009 |
| hydrolase activity | 2.29464693834116 | bayes_pls_golite062009 |
| endopeptidase activity | 2.26699762664334 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| binding | 1.77258741259391 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.07520173658976 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.03279885297458 | bayes_pls_golite062009 |
| protein binding | 0.896934807256194 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.833714375875501 | bayes_pls_golite062009 |
| actin binding | 0.816212666861836 | bayes_pls_golite062009 |
| calcium ion binding | 0.687204894708051 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.495368836247989 | bayes_pls_golite062009 |
| nucleic acid binding | 0.313326619937245 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| DNA binding | 0.053663265361386 | bayes_pls_golite062009 |
| motor activity | 0.0206797712755302 | bayes_pls_golite062009 |
