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View Structure Prediction Details

Protein: CE23612
Organism: Caenorhabditis elegans
Length: 642 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23612.

Description E-value Query
Range
Subject
Range
gi|39589314, gi|... - gi|39589314|emb|CAE74343.1| Hypothetical protein CBG22061 [Caenorhabditis briggsae], gi|187021958|em...
gi|157744951 - gi|157744951|ref|XP_001667572.1| Hypothetical protein CBG22061 [Caenorhabditis briggsae AF16]
708.0 [0..1] [642..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEGQSTSS NPPPVQYYNT FPDDDNLPPE YGPFDEVEPL IEAEQPMKIR TLVAAVGLTV  60
   61 LVFTLLISTV AFASLYFHLL MQNNARLPRW P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPSLSPLGKY SKAAVAADNE ICSEIGRNIL LKGGNAVDSA IAALFCIGVM DTHSAGIGGG  60
   61 HFMTIYNATT KECTVIDARE IAPLAATEEM YRDKWNQSRI GWKAIAVPGE LHGLRTEFER 120
  121 FGSGKVEWRQ LLKPTIDLLA EGYPTSHALA KALNQNEHQI RAEPTMKNFI NPETQRVFQP 180
  181 GEQIKTRQNL LETFRLLANS TDPIADFYTG RLAEQLAKEF EANGGIIRLQ DFKNYKSIVH 240
  241 DSKNVIYTKL KNGRGVCGPP PPSGSAVAQA ILNVMDGFEY NMKSFNEIAT LYHHFLESSK 300
  301 FSYAARSWLG DPQFVANATE IAKNITSKEW ADWVRSKITD TTHPDDYYGG SFEAPPQDHG 360
  361 TTHVSIIDAD GNAVSVTSTI NLYLGALVSS ESTGILWNNE MDDFSTPGHP NFFGFPPSPA 420
  421 NFIRPGKRPM SSQSPLVIFN TKGAELMAVG GAGGSTIISG VAGVALHALW LKADVKQAVD 480
  481 APRMHNQLQP NYTWYEPNFP KAYVKSLIDR GHVMKAVNNL TVVTAAERLS DGQIYANSDF 540
  541 RKGEESAPAG Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 173.0
Match: 2e0wA
Description: No description for 2e0wA was found.

Predicted functions:

Term Confidence Notes
gamma-glutamyltransferase activity 2.74011689892782 bayes_pls_golite062009
peptidase activity 2.6421095563902 bayes_pls_golite062009
transferase activity, transferring amino-acyl groups 2.54551748261349 bayes_pls_golite062009
hydrolase activity 2.49721930187628 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.32542991193149 bayes_pls_golite062009
endopeptidase activity 2.29890628841519 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
binding 0.752066499785082 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0414061586026951 bayes_pls_golite062009
pyrophosphatase activity 0.00597086235697331 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle