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View Structure Prediction Details

Protein: CE22930
Organism: Caenorhabditis elegans
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22930.

Description E-value Query
Range
Subject
Range
gi|50355611 - gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
315.0 [0..1] [341..65]

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Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSATKLSSK ADEAKKQKVF VAMGEDLFEK PANSRSTFNS IILFTLTALT FYIIGSLVQQ  60
   61 RTSESLPTRF QWETPIHMDR TTEEFLDWRE KGIVGPVKDQ GKCNASHAFA ITSSIESMYA 120
  121 KATNGTLLSF SEQQLIDCND QGYKGCEEQF AMNAIGYLAT HGIETEADYP YVDKTNEKCT 180
  181 FDSTKSKIHL KKGVVAEGNE VLGKVYVTNY GPAFFTMRAP PSLYDYKIGI YNPSIEECTS 240
  241 THEIRSMVIV GYGIEGEQKY WIVKGSFGTS WGEQGYMKLA RDVNACAMAT TIAVLTEIFL 300
  301 RVLVSNFCCI SLTVLFKMYH NQSFKCFSGE HPIFFKLYHL CTWRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.0
Match: 1cjlA
Description: CRYSTAL STRUCTURE OF A CYSTEINE PROTEASE PROFORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.44939172906839 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.19661661746208 bayes_pls_golite062009
cysteine-type peptidase activity 2.44287562275675 bayes_pls_golite062009
endopeptidase activity 2.21825711544542 bayes_pls_golite062009
hydrolase activity 2.12149168638347 bayes_pls_golite062009
cysteine-type endopeptidase activity 1.56440572494467 bayes_pls_golite062009
catalytic activity 1.05972260874031 bayes_pls_golite062009
binding 0.325252559537201 bayes_pls_golite062009
small conjugating protein-specific protease activity 0.169941298760462 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle