| Protein: | dpl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 598 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpl-1.
| Description | E-value | Query Range |
Subject Range |
|
|
629.0 | [0..1] | [597..1] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MNPTNYDPRI GQPAQSRPQV SLSMGRRIVQ MPTGLPRSYQ DESHNEPVGW DEPSGVGGSS 60
61 GAGGQQSDKP TGLRHFSTKV CEKVKEKGLT NYNEVADELV ADYFQNNLIK QIDVVKQEYD 120
121 MKNIRRRVYD ALNVLLAMNI ITKSKKDIRW IGLPASASQE ISRLEEEKSR R
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 1cf7B |
| Description: | Cell cycle transcription factor DP-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.98990675336286 | bayes_pls_golite062009 |
| DNA binding | 3.4273272886116 | bayes_pls_golite062009 |
| nucleic acid binding | 3.07556180315429 | bayes_pls_golite062009 |
| transcription factor activity | 2.80110428028438 | bayes_pls_golite062009 |
| binding | 2.18911933843505 | bayes_pls_golite062009 |
| transcription repressor activity | 2.14577668739338 | bayes_pls_golite062009 |
| transcription activator activity | 0.53294679084865 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.53285802828572 | bayes_pls_golite062009 |
| protein binding | 0.035220363090062 | bayes_pls_golite062009 |
|
Region A: Residues: [172-330] |
1 11 21 31 41 51
| | | | | |
1 EASISSKKQA LEEMVLQIVS YKNLVERNRK NEHKNGRPEN DTVLHLPFLI INTDKEANVE 60
61 CSVSSDKSEF LFSFDKKFEI HDDFEILKKL NLACSLETTN PTAEEVKTAK SFLPTLHQHY 120
121 VDEIIANRKK VEAEKEEKRK QQQLIADQMS MNLSQAQYV
|
| Detection Method: | |
| Confidence: | 53.0 |
| Match: | 2azeA |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [331-395] |
1 11 21 31 41 51
| | | | | |
1 EPTSSLAQMS YSSRFNRQLQ EHLINDGSED RSAAAGIMER DYDMDKNVNQ GSASRGPMYN 60
61 TYSPQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [396-456] |
1 11 21 31 41 51
| | | | | |
1 KIRAQVNTPL QVPPVTKRYY VQKTQGPMKH DMTPVVRTVN RPYSTVPPDR RLSTGATSVN 60
61 S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [457-598] |
1 11 21 31 41 51
| | | | | |
1 GPVKYYVPQG HQPMHQPVGQ RYRVRPQQPQ MSHMGQPHQV QQRVVYPAGS ISGHQLQPGQ 60
61 RIVTQRIVAP GGPHPPGTIV RKVIRKIVVN NPKQSPAQQV IQKKMMEQDM CTFERKTEQP 120
121 MTSAQAAALI QHPQPEEYDY FQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
