| Protein: | mrg-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mrg-1.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..3] | [325..7] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MSSKKNFEVG ENVACIYKGK PYDAKITDIK TNSDGKELYC VHFKGWNNRY DEKIPVGEEK 60
61 DRIFKGTASE YAEKHNAELP TTALKPKKKS LAAEAPRDDR DDTPGTSKGK KAKSVTIAPV 120
121
|
| Detection Method: |  |
| Confidence: | 18.522879 |
| Match: | 1wgsA |
| Description: | Solution Structure of the Tudor Domain from Mouse Hypothetical Protein Homologous to Histone Acetyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription repressor activity | 4.08500855631983 | bayes_pls_golite062009 |
| chromatin binding | 3.84065302930105 | bayes_pls_golite062009 |
| transcription regulator activity | 3.64390820819794 | bayes_pls_golite062009 |
| binding | 3.06758476214113 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| nucleic acid binding | 2.19167058827256 | bayes_pls_golite062009 |
| DNA binding | 2.05514577638135 | bayes_pls_golite062009 |
| histone binding | 2.00388175060339 | bayes_pls_golite062009 |
| transcription activator activity | 1.46529895769882 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.10020047862576 | bayes_pls_golite062009 |
| methylated histone residue binding | 1.03331560428208 | bayes_pls_golite062009 |
| general transcriptional repressor activity | 0.75184432495983 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.294457188332415 | bayes_pls_golite062009 |
| catalytic activity | 0.14067200158938 | bayes_pls_golite062009 |
|
Region A: Residues: [121-335] |
1 11 21 31 41 51
| | | | | |
1 MTADDMKVEL PKPLRKILID DYDLVCRYFI NIVPHEYSVD QIIEDYIKTI PVSNEQMRTV 60
61 DDLLIEYEEA DIKITNLALI CTARGLVDYF NVTLGYQLLY KFERPQYNDL VKKRAMEKGI 120
121 DITNPTALQD SGFRPSQEYG IVHFLRMLAK LPDYLKLTQW NDHVINRIMI GVHDLIVFLN 180
181 KNHGKYYRGS SDYQGASNDY YRRSLAADDG VGANQ
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 2aqlA |
| Description: | Crystal Structure of the MRG15 MRG domain |
Matching Structure (courtesy of the PDB): |
|
