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View Structure Prediction Details

Protein: tor-2
Organism: Caenorhabditis elegans
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tor-2.

Description E-value Query
Range
Subject
Range
gi|8575704 - gi|8575704|gb|AAF78058.1|AF263561_3 ClpB protease [secondary endosymbiont of Glycaspis brimblecombei...
281.0 [0..38] [405..489]

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Predicted Domain #1
Region A:
Residues: [1-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFAEKWFL LKFKFYVQCF FIFKFRYQCI NLFFGVISHG YFDVSKNTQI TSDIFCSISF  60
   61 SFTSHLSNIL FYSERKMQFF KYIIFVIILN QLVVDVHSLS MPMFLKCLFY TCCGETDIFN 120
  121 YHALYKDFDN KIFGQHLMAE SVVHSIKSHW HNEHSQKPLV LSFHGGTGTG KNYVTEIIVN 180
  181 NTYRSGMHSP FVNYFVATNN FPNKKYIEDY KLELKDQLIR SARRCQRSIF IFDETDKLQS 240
  241 ELIQVIKPFL DYYPAVFGVD FRKTIFIFLS NKGSKEIANI ALEHHENGKI RSQLELKHFE 300
  301 RTLMLSAFNE EGGLRNTDMI SNQLIDHFIP FLPLSKFYVS QCIQVHLRKR GRHDLAKDGE 360
  361 FMQRVLDSLE FFPESSKIFS SSGCKRVNAK TDLEISKMGF SLNSKKEFND EL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.154902
Match: 1qvrA
Description: Crystal Structure Analysis of ClpB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.64537357529343 bayes_pls_golite062009
hydrolase activity 1.1574342089649 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.948012599424412 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.946775815096981 bayes_pls_golite062009
pyrophosphatase activity 0.943793957809966 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.923981227281218 bayes_pls_golite062009
nucleic acid binding 0.901460716954519 bayes_pls_golite062009
purine nucleotide binding 0.569910969126728 bayes_pls_golite062009
purine ribonucleotide binding 0.568840867400671 bayes_pls_golite062009
ribonucleotide binding 0.568779924702229 bayes_pls_golite062009
nucleotide binding 0.564275755355315 bayes_pls_golite062009
microtubule motor activity 0.489468237062011 bayes_pls_golite062009
DNA binding 0.479412476059825 bayes_pls_golite062009
transcription regulator activity 0.312171320541728 bayes_pls_golite062009
cytoskeletal protein binding 0.287518545027238 bayes_pls_golite062009
structural constituent of ribosome 0.208665086324262 bayes_pls_golite062009
ATP binding 0.1860481660648 bayes_pls_golite062009
protein binding 0.170837278876362 bayes_pls_golite062009
adenyl ribonucleotide binding 0.152859582615242 bayes_pls_golite062009
adenyl nucleotide binding 0.138615225841109 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle