| Protein: | CE16735 |
| Organism: | Caenorhabditis elegans |
| Length: | 433 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MSSGPATSGS SSAHTETQVV DEIPEALNTI LLMVVKNFFS SEHFIIVYHI MRAQCIREEN 60
61 LKARIQFDQK MLRQLLASLK AEKLVKERTI TQKNENNRTV SIIFYYINYR AVLNVVRYKI 120
121 DHMRQKLESR EQMDTNRAHY RC
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1q1hA |
| Description: | An extended winged helix domain in general transcription factor E/IIE alpha |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.04426015975991 | bayes_pls_golite062009 |
| binding | 1.99063774159045 | bayes_pls_golite062009 |
| DNA binding | 1.63968725174405 | bayes_pls_golite062009 |
| nucleic acid binding | 1.51035375793093 | bayes_pls_golite062009 |
| transcription factor activity | 1.16072080355661 | bayes_pls_golite062009 |
| transcription activator activity | 0.14130464856269 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.13573040816325 | bayes_pls_golite062009 |
|
Region A: Residues: [143-178] |
1 11 21 31 41 51
| | | | | |
1 GACQSSYDML EINRILDAES GRLICWRCHG DVLADE
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 1vd4A |
| Description: | Solution structure of the zinc finger domain of TFIIE alpha |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.521842894436076 | bayes_pls_golite062009 |
|
Region A: Residues: [179-433] |
1 11 21 31 41 51
| | | | | |
1 TVVPSRTTRT AVARFNEQMT PLFSHICALN GIQLAPHLLE PDITKYLEDD KELQLQQQQM 60
61 DFTSGGGGGG RIQLGGVAHS YQNIASINYQ NGDAVFVDLN ADINKGPVEE AKIMPEWLKD 120
121 NAIGGGEASH NEHVLDQAKT EEEETSTKQR RYGPSLDYLK EIECSSEESA PNVKIEEPPA 180
181 KQIKMEVDEE AIKMEVDNDE SEEEDLIHVA GRALPLSQIT PRMVENEMSE LEKESYCSVV 240
241 QDLFAMFFSQ QIAIH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
