Protein: | ttm-1 |
Organism: | Caenorhabditis elegans |
Length: | 410 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ttm-1.
Description | E-value | Query Range |
Subject Range |
|
276.0 | [0..7] | [407..271] |
Region A: Residues: [1-92] |
1 11 21 31 41 51 | | | | | | 1 MTISMISPSS IRLSSDKRDS SSSNLPANIE EDTQSVSSSD SGVSADSIDH HHHGHGHGHS 60 61 HGGHGHSHTH NNDDSSSDCS GAGGGAHKHS HD |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [93-410] |
1 11 21 31 41 51 | | | | | | 1 EKYQKGRRAE KVLWAVAALS AVFIAAEFVG GFWAQSLAIM TDAGHMLSDL LSFIISIFAI 60 61 RCARLPASKR LSFGYERAEV LGALTSVIIL WVLTTVLVVV AIQRIVNNEH EVDADVMLIT 120 121 AGVGVLFNIV MGLVLHFGTG GHGHTHGGHS SHGHAHDGKN VNVRAALIHV IGDLVQSIGV 180 181 LIAALIIRFT GWTLADPICT FLFSIIVLFT TVTVMRDIFF VLMEATPSHY DLSDVKKALS 240 241 ALEGVKGVHD LHLWSIGMDK TAFSVHLALE SPNRAMENVA EARSLIRRRF GVAVATVQVE 300 301 PFDEKIDSCD TCQQQETA |
Detection Method: | |
Confidence: | 53.69897 |
Match: | 2qfiA |
Description: | No description for 2qfiA was found. |
Term | Confidence | Notes |
cation transmembrane transporter activity | 6.3253503604398 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 6.22189384650962 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 5.82185991246167 | bayes_pls_golite062009 |
transporter activity | 4.27173462293249 | bayes_pls_golite062009 |
transmembrane transporter activity | 4.18558383943492 | bayes_pls_golite062009 |
substrate-specific transporter activity | 3.94511592355578 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 2.43294134632841 | bayes_pls_golite062009 |
transition metal ion transmembrane transporter activity | 2.32644140472297 | bayes_pls_golite062009 |
efflux transmembrane transporter activity | 1.98656970252979 | bayes_pls_golite062009 |
inorganic cation transmembrane transporter activity | 1.95281540802467 | bayes_pls_golite062009 |
cation channel activity | 1.55011961058299 | bayes_pls_golite062009 |
di-, tri-valent inorganic cation transmembrane transporter activity | 1.31663166812163 | bayes_pls_golite062009 |
binding | 1.27456652114636 | bayes_pls_golite062009 |
ion channel activity | 1.01093555209783 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 0.963824080292546 | bayes_pls_golite062009 |
channel activity | 0.963824080292546 | bayes_pls_golite062009 |
substrate-specific channel activity | 0.948079854416241 | bayes_pls_golite062009 |
cadmium ion transmembrane transporter activity | 0.661906409169955 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.490905558612378 | bayes_pls_golite062009 |
iron ion transmembrane transporter activity | 0.376948884172728 | bayes_pls_golite062009 |
protein binding | 0.311357063667067 | bayes_pls_golite062009 |