| Protein: | lec-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 279 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lec-1.
| Description | E-value | Query Range |
Subject Range |
|
|
329.0 | [0..1] | [278..968] |
|
|
318.0 | [0..1] | [279..1] |
|
|
316.0 | [0..1] | [278..1] |
|
|
314.0 | [0..1] | [278..1] |
|
|
307.0 | [0..1] | [277..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MSAEEPKSYP VPYRSVLQEK FEPGQTLIVK GSTIDESQRF TINLHSKTAD FSGNDVPLHV 60
61 SVRFDEGKIV LNSFSNGEWG KEERKSNPIK KGDSFDIRIR AHDDRFQIIV DHKEFKDYEH 120
121 RLPLSSISHL SIDGDLYLNH VHWGGKYYPV PYESG
|
| Detection Method: |  |
| Confidence: | 41.154902 |
| Match: | 2dycA |
| Description: | No description for 2dycA was found. |
|
Region A: Residues: [156-279] |
1 11 21 31 41 51
| | | | | |
1 LANGLPVGKS LLVFGTVEKK AKRFHVNLLR KNGDISFHFN PRFDEKHVIR NSLAANEWGN 60
61 EEREGKNPFE KGVGFDLVIQ NEEYAFQVFV NGERYISFAH RADPHDIAGL QISGDIELSG 120
121 IQIQ
|
| Detection Method: | |
| Confidence: | 38.522879 |
| Match: | 1w6mA |
| Description: | X-RAY CRYSTAL STRUCTURE OF C2S HUMAN GALECTIN-1 COMPLEXED WITH GALACTOSE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sugar binding | 3.34064405064299 | bayes_pls_golite062009 |
| binding | 2.40096962515027 | bayes_pls_golite062009 |
| monosaccharide binding | 2.09529521879228 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 1.81440764049964 | bayes_pls_golite062009 |
| protein binding | 1.80794638640093 | bayes_pls_golite062009 |
| extracellular matrix binding | 1.41229380365824 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.25720635817943 | bayes_pls_golite062009 |
| molecular transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
| signal transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
| polysaccharide binding | 1.09475063562581 | bayes_pls_golite062009 |
| pattern binding | 0.969915174528009 | bayes_pls_golite062009 |
| receptor binding | 0.9012250808046 | bayes_pls_golite062009 |
| heparin binding | 0.526582971950561 | bayes_pls_golite062009 |
| receptor activity | 0.376562682962271 | bayes_pls_golite062009 |
| transcription regulator activity | 0.372701974560119 | bayes_pls_golite062009 |
| laminin binding | 0.31629065463492 | bayes_pls_golite062009 |
| fibronectin binding | 0.296652398618881 | bayes_pls_golite062009 |
| nucleic acid binding | 0.216086300988177 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.213382263378401 | bayes_pls_golite062009 |
| DNA binding | 0.157628282318248 | bayes_pls_golite062009 |
| growth factor activity | 0.119475011376319 | bayes_pls_golite062009 |
| lactose binding | 0.0476297330938394 | bayes_pls_golite062009 |
