Protein: | unc-115 |
Organism: | Caenorhabditis elegans |
Length: | 625 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-115.
Description | E-value | Query Range |
Subject Range |
|
528.0 | [0..4] | [466..2410] |
Region A: Residues: [1-181] |
1 11 21 31 41 51 | | | | | | 1 MGKKCDVCRK KCSGDVLKAN DKYFHINCFQ CKKCGRNLGE TGFYTTPENA YLCPDDFRAV 60 61 SKEITVKTTT QQAHASSSSA ATPKSPEKSN GTTDVSSSGA ANATLQQISP LGSPTTCAAC 120 121 DQALHSGQVL LALGLSWHVY CFKCSECSAV LHGEYMSHHG KPLCLRDYNE KFGVKCYECE 180 181 K |
Detection Method: | |
Confidence: | 48.045757 |
Match: | 2i13A |
Description: | No description for 2i13A was found. |
Region A: Residues: [182-224] |
1 11 21 31 41 51 | | | | | | 1 FIAGKVLQAG GYKFHPTCAR CSRCGSHFGD GEEMYMQGDE IWH |
Detection Method: | |
Confidence: | 2.87 |
Match: | 1v6gA |
Description: | Solution Structure of the LIM Domain of the Human Actin Binding LIM Protein 2 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.33031501809283 | bayes_pls_golite062009 |
protein binding | 0.484915054040372 | bayes_pls_golite062009 |
transcription regulator activity | 0.340288079661743 | bayes_pls_golite062009 |
DNA binding | 0.00134487825101615 | bayes_pls_golite062009 |
Region A: Residues: [225-326] |
1 11 21 31 41 51 | | | | | | 1 PSCEHARTTE NIAPTGRAAT LSRNEPKYQS TFGQHQAYMY LLPEVEQTYL RHPVMNAKEP 60 61 NAPQYHVPQG PIKIRKSRMS MLKTGMQRLT EDLEKNIPRP KS |
Detection Method: | |
Confidence: | 13.69897 |
Match: | 1a1fA |
Description: | ZIF268 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [327-465] |
1 11 21 31 41 51 | | | | | | 1 PHMDNEEPIE LAHYPAAHVP DPDTLPAIER EDFPAPQFPY AVEELKRRLS TSSVENEISD 60 61 DEYSESDKVD EDKLRKTVET LEKYNDSSIA HVIRQNIEDS HKKQRLPLHW DPRNASRTPS 120 121 GKKMPHLKFR YDVPINASP |
Detection Method: | |
Confidence: | 10.0 |
Match: | 2cotA |
Description: | Solution structure of the first and second zf-C2H2 domain of Zinc finger protein 435 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.5693324142242 | bayes_pls_golite062009 |
transcription regulator activity | 1.20084827450202 | bayes_pls_golite062009 |
DNA binding | 1.11228868978256 | bayes_pls_golite062009 |
nucleic acid binding | 1.10067326005752 | bayes_pls_golite062009 |
transcription factor activity | 0.33874886911135 | bayes_pls_golite062009 |
protein binding | 0.186544761618633 | bayes_pls_golite062009 |
Region A: Residues: [466-544] |
1 11 21 31 41 51 | | | | | | 1 SRHLNRPRPW VVWQGGERDQ GNNTLPCFHI PEDSRANTLR AATLPTEFGQ NLSLENLDTT 60 61 ISSHYSEHST TESGTAGGP |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [545-625] |
1 11 21 31 41 51 | | | | | | 1 RSAGGAVLRS SLPDMSKPAK QYDLLFLQTT NSDLPEDVDR QHLERHLPRD QFEEIFKMSL 60 61 IEFYKLPEWK RINLKRKHKL F |
Detection Method: | |
Confidence: | 25.69897 |
Match: | 1ujsA |
Description: | Solution structure of the Villin headpiece domain of human actin-binding LIM protein homologue (KIAA0843 protein) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.890394134199723 | bayes_pls_golite062009 |