| Protein: | CE11480 |
| Organism: | Caenorhabditis elegans |
| Length: | 474 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11480.
| Description | E-value | Query Range |
Subject Range |
|
|
344.0 | [0..89] | [471..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MKQGFLIYYS RLLLDFRAFF CRALALAIFF VQFSICITQL VQKLFICVNT TFLCAERGEM 60
61 ITGGTKILRN TFQSIKLEDN RKIFIFHK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-474] |
1 11 21 31 41 51
| | | | | |
1 MFGKLISLLG LVALCSAGQF SISVEKSGSL REQLIREGRY GQELARIQQL STGNVSFFDH 60
61 FDEYYTAGVR IGTPAQHFQV AFDTTSSNLW VFGVECRSQN CHGGRGRRDR EYNRTASSTF 120
121 VAGTSSFNLP YDGGHVSGNV GKDTAQFAGF TIQSQDFGIG TAATRLFGET FDGVLGLGWP 180
181 ATALNGTSTT MQNLLPQLDQ KLFTTYFTKS NMHNGTAGGD IMFGAIDTTH CQSQVNYVPL 240
241 AYNSFWSYSV DGFSIGTYSR TQTETTIPDT SSGWTGVPNV VLAGIVKATG ATYDWNHQAY 300
301 TLPCSSTATL PDMVFTIGGN SYNVRAVEYV VNLNLPNGQC ALSLFGTAAS QSGPAWILGD 360
361 NFLRSYCHVF DFGNSRIGLA KAIQNY
|
| Detection Method: | |
| Confidence: | 85.221849 |
| Match: | 2psgA |
| Description: | REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aspartic-type endopeptidase activity | 7.9145950161796 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 7.9145950161796 | bayes_pls_golite062009 |
| peptidase activity | 5.78181196721293 | bayes_pls_golite062009 |
| endopeptidase activity | 5.4888481808613 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 5.39972232367526 | bayes_pls_golite062009 |
| hydrolase activity | 4.34796304893506 | bayes_pls_golite062009 |
| catalytic activity | 1.54514410489082 | bayes_pls_golite062009 |
| protein binding | 1.24436201877985 | bayes_pls_golite062009 |
| binding | 1.10054369202721 | bayes_pls_golite062009 |
| receptor binding | 1.06854757360057 | bayes_pls_golite062009 |
