| Protein: | try-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 265 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for try-2.
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..18] | [264..155] |
|
|
258.0 | [0..4] | [262..154] |
|
|
258.0 | [0..3] | [260..541] |
|
|
257.0 | [0..3] | [260..541] |
|
|
256.0 | [0..23] | [258..183] |
|
Region A: Residues: [1-265] |
1 11 21 31 41 51
| | | | | |
1 MSSASQCGLR YVEVNARDAA KSRIARVVGG FETVPGAFPW TAALRNKATK AHHCGASILD 60
61 KTHLITAAHC FEEDERVSSY EVVVGDWDNN QTDGNEQIFY LQRIHFYPLY KDIFSHDIAI 120
121 LEIPYPGIEF NEYAQPICLP SKDFVYTPGR QCVVSGWGSM GLRYAERLQA ALIPIINRFD 180
181 CVNSSQIYSS MSRSAFCAGY LEGGIDSCQG DSGGPFACRR EDGAFVLAGV ISWGDGCAQK 240
241 KQPGIYTMVA PYLSWISAII NGQPV
|
| Detection Method: |  |
| Confidence: | 67.0 |
| Match: | 1buiA |
| Description: | Plasmin(ogen), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.91209560688646 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 5.52773635813967 | bayes_pls_golite062009 |
| serine hydrolase activity | 5.5105092190926 | bayes_pls_golite062009 |
| serine-type peptidase activity | 5.49703869306079 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 5.39623690248556 | bayes_pls_golite062009 |
| endopeptidase activity | 5.32070018460528 | bayes_pls_golite062009 |
| hydrolase activity | 4.40346950809697 | bayes_pls_golite062009 |
| fucose binding | 3.5000591397073 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.01328116441763 | bayes_pls_golite062009 |
| calcium-dependent protein binding | 1.96509840108953 | bayes_pls_golite062009 |
| nucleic acid binding | 1.73928761064649 | bayes_pls_golite062009 |
| DNA binding | 1.61536775064425 | bayes_pls_golite062009 |
| heparin binding | 1.48285358055737 | bayes_pls_golite062009 |
| thrombospondin receptor activity | 1.44312413043539 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| polysaccharide binding | 1.34665327732001 | bayes_pls_golite062009 |
| binding | 1.30738106455622 | bayes_pls_golite062009 |
| protein binding | 1.30414885212044 | bayes_pls_golite062009 |
| receptor activity | 1.10676631226741 | bayes_pls_golite062009 |
| serine-type aminopeptidase activity | 0.964413112640311 | bayes_pls_golite062009 |
| signal transducer activity | 0.885246794092463 | bayes_pls_golite062009 |
| molecular transducer activity | 0.885246794092463 | bayes_pls_golite062009 |
| growth factor activity | 0.848900101748605 | bayes_pls_golite062009 |
| receptor binding | 0.79054390509229 | bayes_pls_golite062009 |
| calcium ion binding | 0.753095272942721 | bayes_pls_golite062009 |
| sodium channel regulator activity | 0.30724450617383 | bayes_pls_golite062009 |
