| Protein: | CE06744 |
| Organism: | Caenorhabditis elegans |
| Length: | 631 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06744.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..2] | [622..3] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MVYTPKNVVI TGGCGFIGSN FVNYIHDAWP TCNFVNIDKL ILNSDTQNVA ESVRNSPRYK 60
61 LVLTDIKNEA AILNVFEQNE IDTVIHFAAD CTSTRCYNET AEAVQNNVLS FIQFLETVRT 120
121 YGKIKRFVHI STDEVYGDSD LSENEQGKVE FSRLVPGNPY AATKIAGEAY VRAYQTQYNL 180
181 PIVTARMNNI YGPNQWDVKV VPRFIEIAKV RGEYTIQGSG KQLRSWLFVD DASAGLKAVC 240
241 EKGELHEIYN LGTYYEKNVA DLAKTIQEEV DLQLGRAHEP PKYKSIPDRP YNDLRYLISI 300
301 EKAKNDLGWE PTTSFDDGMR HTVASALKEH KHVKMHVAI
|
| Detection Method: |  |
| Confidence: | 92.09691 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
|
Region A: Residues: [340-631] |
1 11 21 31 41 51
| | | | | |
1 YGGKGYVGQE LQHVLNDRHI PYVLATKKVG FDSDEEVERE LALLGVTHVI CVTGRTHGPG 60
61 CNTIEYLEGR ADKVFINVRD NMYSATILAH MCRKLGLHYT YIGTGYMFAY DKEHPIGGAE 120
121 FKEEDEPTFF GSAYSVVKGF TDRQMNYFNQ NGWENLNVRI TLPLSLDLEQ PRNLLSKIIK 180
181 YKELFDIPVS LTILPDCMNA MCNLMEQRSG GTLNLVNPEP ISLYEVVKIY KEIVDETVNP 240
241 TSIGVETERA QHLLATKGNC ALDTEKLQSL APVLSAKQSL IKHFSEMTSA AK
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 1bsvA |
| Description: | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
