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View Structure Prediction Details

Protein: dhs-12
Organism: Caenorhabditis elegans
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dhs-12.

Description E-value Query
Range
Subject
Range
gi|255313843 - gi|255313843|ref|ZP_05355426.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile QC...
gi|255516524 - gi|255516524|ref|ZP_05384200.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile QC...
gi|255649624 - gi|255649624|ref|ZP_05396526.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile QC...
gi|254974717 - gi|254974717|ref|ZP_05271189.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile QC...
gi|255092105 - gi|255092105|ref|ZP_05321583.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile CI...
gi|90575404, gi|... - gi|90575404|ref|ZP_01231888.1| hypothetical protein CdifQ_02001165 [Clostridium difficile QCD-32g58]...
267.0 [0..1] [253..4]
gi|115250215, gi... - gi|126698778|ref|YP_001087675.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile 6...
gi|255306086 - gi|255306086|ref|ZP_05350258.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile AT...
gi|255100197 - gi|255100197|ref|ZP_05329174.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile QC...
267.0 [0..1] [253..4]
gi|146296617, gi... - gi|82501013|ref|ZP_00886394.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Caldicellulosiruptor sacc...
263.0 [0..1] [253..4]
gi|89098688, gi|... - gi|89098688|ref|ZP_01171570.1| beta-ketoacyl-acyl carrier protein reductase [Bacillus sp. NRRL B-149...
262.0 [0..1] [253..3]
gi|18310052, gi|... - gi|18310052|ref|NP_561986.1| 3-ketoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens st...
259.0 [0..1] [253..2]
gi|1502421 - gi|1502421|gb|AAC44307.1| 3-ketoacyl-acyl carrier protein reductase
gi|1502421|gb|AA... - 3-ketoacyl-acyl carrier protein reductase
258.0 [0..1] [253..2]
gi|221313791 - gi|221313791|ref|ZP_03595596.1| beta-ketoacyl-acyl carrier protein reductase [Bacillus subtilis subs...
gi|221318715 - gi|221318715|ref|ZP_03600009.1| beta-ketoacyl-acyl carrier protein reductase [Bacillus subtilis subs...
gi|221322986 - gi|221322986|ref|ZP_03604280.1| beta-ketoacyl-acyl carrier protein reductase [Bacillus subtilis subs...
FABG_BACSU - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis GN=fabG PE=3 SV=3
FABG_BACSU - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3
257.0 [0..1] [253..2]
gi|25283158 - pir||C83961 3-oxoacyl-(acyl-carrier protein) reductase fabG [imported] - Bacillus halodurans (strain...
gi|10175111, gi|... - gi|15615054|ref|NP_243357.1| 3-oxoacyl-(acyl-carrier protein) reductase [Bacillus halodurans C-125],...
256.0 [0..1] [253..2]
gi|77636803, gi|... - gi|77687397|ref|ZP_00802638.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Alkaliphilus metalliredig...
256.0 [0..1] [252..4]
gi|168210762, gi... - gi|170711222|gb|EDT23404.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens B st...
gi|110675446, gi... - gi|110800799|ref|YP_695772.1| 3-ketoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens A...
gi|170660709, gi... - gi|170660709|gb|EDT13392.1| 3-oxoacyl- reductase [Clostridium perfringens E str. JGS1987], gi|168207...
255.0 [0..1] [253..2]

Back

Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKTIFITG ANRGIGLGLV RELLKVPGVE ALVAGARNID GAKELQSLAK ADARLHLIAV  60
   61 DVSNDGSLEN SVKSVSGIVG DRGLNLLINN AGLIESYGTT SAPNRASVLH CIDVNAVSAL 120
  121 LASQHFLPLL QKAASHVSGD SLTPDRAAIV NIGSDCASQA LNLRGSGPSN SLLAYKMSKV 180
  181 AMLSFSRSMA ADFKRLEIPV LITNIHPGWV QTDMGGSNAE ISVDESVTKI VASIAKLNGG 240
  241 HQGGLFNREL EEMPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1snyA
Description: Carbonyl reductase Sniffer of D. melanogaster
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.79741889688267 bayes_pls_golite062009
binding 0.982999356179965 bayes_pls_golite062009
DNA binding 0.302492036575815 bayes_pls_golite062009
transcription regulator activity 0.177044638410302 bayes_pls_golite062009
nucleic acid binding 0.150346154405223 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle