| Protein: | cel-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 573 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cel-1.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..3] | [573..6] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MGLPDRWLHC PKTGTLINNL FFPFKTPLCK MYDNQIAERR YQFHPAEVFS HPHLHGKKIG 60
61 LWIDLTNTDR YYFREEVTEH ECIYHKMKMA GRGVSPTQED TDNFIKLVQE FHKKYPDRVV 120
121 GVHCTHGFNR TGFLIAAYLF QVEEYGLDAA IGEFAENRQK GIYKQDYIDD LFARYDPTED 180
181 DKILAPEKPD WEREMS
|
| Detection Method: |  |
| Confidence: | 32.69897 |
| Match: | 2c46A |
| Description: | CRYSTAL STRUCTURE OF THE HUMAN RNA guanylyltransferase and 5'- phosphatase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [197-359] |
1 11 21 31 41 51
| | | | | |
1 IGMSTQIDNG RPSTSQQIPA TNGNNNQNGN QLSGGGDNSK LFMDGLIRGV KVCEDEGKKS 60
61 MLQAKIKNLC KYNKQGFPGL QPVSLSRGNI NLLEQESYMV SWKADGMRYI IYINDGDVYA 120
121 FDRDNEVFEI ENLDFVTKNG APLMETLVDT EVIIDKVEIN GAM
|
| Detection Method: | |
| Confidence: | 2.38 |
| Match: | 1ckmA |
| Description: | RNA guanylyltransferase (mRNA capping enzyme); RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| mRNA guanylyltransferase activity | 8.44951560480445 | bayes_pls_golite062009 |
| RNA guanylyltransferase activity | 8.02773775185769 | bayes_pls_golite062009 |
| guanylyltransferase activity | 5.17049957294188 | bayes_pls_golite062009 |
| ligase activity | 2.32117041900947 | bayes_pls_golite062009 |
| ligase activity, forming phosphoric ester bonds | 2.12202868529213 | bayes_pls_golite062009 |
| DNA ligase activity | 2.10005856611468 | bayes_pls_golite062009 |
| catalytic activity | 1.98004058504857 | bayes_pls_golite062009 |
| binding | 1.6492328714954 | bayes_pls_golite062009 |
| nucleic acid binding | 1.36512645572174 | bayes_pls_golite062009 |
| DNA binding | 1.30570045339175 | bayes_pls_golite062009 |
| DNA ligase (ATP) activity | 0.353057247533014 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.293080071585386 | bayes_pls_golite062009 |
| protein binding | 0.244939883018638 | bayes_pls_golite062009 |
| ATP binding | 0.0764964990255529 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.0486642748854728 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.0414617030999805 | bayes_pls_golite062009 |
|
Region A: Residues: [360-573] |
1 11 21 31 41 51
| | | | | |
1 CDQPRMLIYD IMRFNSVNVM KEPFYKRFEI IKTEIIDMRT AAFKTGRLKH ENQIMSVRRK 60
61 DFYDLEATAK LFGPKFVQHV GHEIDGLIFQ PKKTKYETGR CDKVLKWKPP SHNSVDFLLK 120
121 VEKKCKEGML PEWIGYLFVQ NLSDPFGTMK ATATLKKYHN KIIECTLLVD NQGRPKEWKF 180
181 MRERTDKSLP NGLRTAENVV ETMVNPVTET YLIE
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1x9nA |
| Description: | Crystal Structure of Human DNA Ligase I bound to 5'-adenylated, nicked DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| mRNA guanylyltransferase activity | 8.90512192081791 | bayes_pls_golite062009 |
| RNA guanylyltransferase activity | 8.46124967325993 | bayes_pls_golite062009 |
| guanylyltransferase activity | 5.45528434251369 | bayes_pls_golite062009 |
| ligase activity, forming phosphoric ester bonds | 2.90848936326491 | bayes_pls_golite062009 |
| DNA ligase activity | 2.88630907730339 | bayes_pls_golite062009 |
| ligase activity | 2.7348192562888 | bayes_pls_golite062009 |
| catalytic activity | 2.15370807854636 | bayes_pls_golite062009 |
| binding | 1.63149986094272 | bayes_pls_golite062009 |
| nucleic acid binding | 1.39097817404242 | bayes_pls_golite062009 |
| DNA binding | 1.33524321669723 | bayes_pls_golite062009 |
| DNA ligase (ATP) activity | 1.02324195596817 | bayes_pls_golite062009 |
| DNA ligase (NAD+) activity | 0.571203360462711 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.287720615514972 | bayes_pls_golite062009 |
| protein binding | 0.229784545879049 | bayes_pls_golite062009 |
| ATP binding | 0.17947590671995 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.148991737494582 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138964074823321 | bayes_pls_golite062009 |
