| Protein: | vha-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 451 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vha-18.
| Description | E-value | Query Range |
Subject Range |
|
|
464.0 | [0..11] | [451..16] |
|
Region A: Residues: [1-451] |
1 11 21 31 41 51
| | | | | |
1 MVFGENQDLI RTHFQKEADK VRAMKTNWGL FTRTRMIAQS DYDFIVTYQQ AENEAERSTV 60
61 LSVFKEKAVY AFVHLMSQIS KDDYVRYTLT LIDDMLREDV TRTIIFEDVA VLLKRSPFSF 120
121 FMGLLHRQDQ YIVHITFSIL TKMAVFGNIK LSGDELDYCM GSLKEAMNRG TNNDYIVTAV 180
181 RCMQTLFRFD PYRVSFVNIN GYDSLTHALY STRKCGFQIQ YQIIFCMWLL TFNGHAAEVA 240
241 LSGNLIQTIS GILGNCQKEK VIRIVVSTLR NLITSNQDVY MKKQAALQMI QNRIPTKLDH 300
301 LENRKFTDVD LVEDMVYLQT ELKKVVQVLT SFDEYENELR QGSLHWSPAH KCEVFWNENA 360
361 HRLNDNRQEL LKLLVAMLEK SNDPLVLCVA AHDIGEFVRY YPRGKLKVEQ LGGKEAMMRL 420
421 LTVKDPNVRY HALLAAQKLM INNWKDLGLE I
|
| Detection Method: |  |
| Confidence: | 68.0 |
| Match: | 1ho8A |
| Description: | Regulatory subunit H of the V-type ATPase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 8.27793692177437 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 6.61991113486273 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 5.91856058767561 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 3.08652472111805 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.01705909078235 | bayes_pls_golite062009 |
| protein transporter activity | 2.91465420196082 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.62570967627286 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.5665080711484 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| binding | 2.4389817190572 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| clathrin binding | 2.07672364145383 | bayes_pls_golite062009 |
| RNA binding | 1.90677197622326 | bayes_pls_golite062009 |
| protein binding | 1.63705839411934 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 1.60849969922683 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.02389895825558 | bayes_pls_golite062009 |
| hydrolase activity | 0.528047226063932 | bayes_pls_golite062009 |
| nucleic acid binding | 0.294257360897755 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| signal sequence binding | 0.14931345687137 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 0.0949889863173228 | bayes_pls_golite062009 |
| signal transducer activity | 0.0689818654521059 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0689818654521059 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
