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View Structure Prediction Details

Protein: asb-1
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asb-1.

Description E-value Query
Range		 Subject
Range
gi|157775227 - gi|157775227|ref|XP_001665679.1| hypothetical protein CBG18031 [Caenorhabditis briggsae AF16]
gi|187025092, gi... - gi|39591597|emb|CAE71174.1| Hypothetical protein CBG18031 [Caenorhabditis briggsae], gi|187025092|em...
 405.0 [0..3] [301..2]

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Predicted Domain #1
Region A:
Residues: [1-82] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSRLSSPQ TFSRVFIVAR GAATGHAVAP SSDNSIGYFE KIAYRFKGIP LPTETEAPKS  60
   61 MFDACNKEWS APELLPSVPK DF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 1wryA
Description: Solution structure of the SH3 domain-binding glutamic acid-rich-like protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [83-301] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEHPDRDLTN YPYPSRPMYP PKTRLLMMPD SWFTAFQKVT GTSGPYLFFG GLFAFLVNKE  60
   61 LWVFEEQGHM TVGWILFYLL VSRTAGYKID AGLYKDYQER VGFFKGLIQE DLKEAVDFRK 120
  121 TSAAQTASFA ALKEGMPTSL KDSMQLQLEA AYRKNVQTIS NEIKRRIEYL KETEETKARF 180
  181 ERDQLLKLIN DSVEKQVSQK DFQEKFLQNA IQQLKGIAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.30103
Match: 2clyA
Description: No description for 2clyA was found.

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 9.75824095339252 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 8.02996687028513 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 7.03421298777104 bayes_pls_golite062009
hydrogen-exporting ATPase activity, phosphorylative mechanism 6.33533983608004 bayes_pls_golite062009
cation transmembrane transporter activity 3.43905785379115 bayes_pls_golite062009
ion transmembrane transporter activity 3.40493178308083 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.11087315592201 bayes_pls_golite062009
transporter activity 2.33132024466294 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 2.14184902122852 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.91129736413093 bayes_pls_golite062009
nucleoside-triphosphatase activity 1.68240669590269 bayes_pls_golite062009
pyrophosphatase activity 1.61544861060476 bayes_pls_golite062009
ATPase activity 1.60552572277149 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.5982352071671 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.5958855657846 bayes_pls_golite062009
transmembrane transporter activity 1.51271412556287 bayes_pls_golite062009
binding 1.49944320981267 bayes_pls_golite062009
substrate-specific transporter activity 1.35431931487507 bayes_pls_golite062009
primary active transmembrane transporter activity 0.907643434530535 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.90151467619641 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.873541340643087 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.870099443464063 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.870012300409237 bayes_pls_golite062009
active transmembrane transporter activity 0.869408183980935 bayes_pls_golite062009
protein binding 0.657209772972993 bayes_pls_golite062009
hydrolase activity 0.636687378087875 bayes_pls_golite062009
ATPase activity, coupled 0.423824294580682 bayes_pls_golite062009
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