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View Structure Prediction Details

Protein: his7
Organism: Schizosaccharomyces pombe
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for his7.

Description E-value Query
Range
Subject
Range
gi|49085660, gi|... - gi|67517033|ref|XP_658401.1| hypothetical protein AN0797.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
421.0 [0..1] [411..1]
gi|67787, gi|224... - pir||SHNC phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / phosphoribosyl-ATP diphosphatase (EC 3.6...
414.0 [0..17] [414..25]
HIS2_NEUCR - Histidine biosynthesis trifunctional protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / ...
HIS2_NEUCR - Histidine biosynthesis trifunctional protein OS=Neurospora crassa GN=his-3 PE=3 SV=3
403.0 [0..17] [403..25]
gi|39951333, gi|... - gi|39951333|ref|XP_363383.1| hypothetical protein MGG_01309 [Magnaporthe grisea 70-15], gb|EAA55658....
398.0 [0..1] [403..5]
gi|114197605, gi... - gi|115492235|ref|XP_001210745.1| histidinol dehydrogenase [Aspergillus terreus NIH2624], gi|11419760...
388.0 [0..1] [403..1]
gi|2623127 - gi|2623127|gb|AAC53724.1| histidinol dehydrogenase [Expression vector pIB4]
gi|2623118 - gi|2623118|gb|AAC53718.1| histidinol dehydrogenase [Expression vector pIB1]
gi|2623121 - gi|2623121|gb|AAC53720.1| histidinol dehydrogenase [Expression vector pIB2]
gi|2623124 - gi|2623124|gb|AAC53722.1| histidinol dehydrogenase [Expression vector pIB3]
386.0 [0..7] [408..3]
gi|3203 - gi|3203|emb|CAA39641.1| histidinol dehydrogenase; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-...
386.0 [0..7] [408..3]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLPFFDLT NFESDASEEL GWLKYVGRVQ TRVFPQHFKD NLEKVRKISE TIDVIVDTTA  60
   61 ELGPEACVNL LNAGALAILV NEEMLNELAD ISPNRLVLKT DTTDIGKIEK LSQVAGSIQW 120
  121 IGSAENYPPD FFERASKIIH KAVMPEGGGR TLYLEFPEQP SMEVLKSFSV HSVVPVLSSS 180
  181 FLTVKPAEEP KKLSLADLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LISANTDRED GLFSTLVVNE LGIALGLVYS SKESVAESLK TGTGVYQSRK RGLWYKGASS  60
   61 GAVQHLIHID VDCDEDCLRF VVYQTGKGFC HLDTLHCFGQ A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 1zpsA
Description: Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoribosyl-AMP cyclohydrolase activity 4.07350794147607 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.83474502448328 bayes_pls_golite062009
catalytic activity 1.02941336036162 bayes_pls_golite062009
cyclohydrolase activity 0.335226474674779 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.0625072987078716 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [301-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLCQLEKTL IDRKNNAPEG SYTARLFSDP KLLRAKIMEE AEELCDATTK ENVIWEMADL  60
   61 MYFAITRCVG SGVSLNDISR HLDLKHRKVT RRKGDAKVAW QEKLKDKGGV ANTSYTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1yvwA
Description: Crystal structure of Phosphoribosyl-ATP pyrophosphohydrolase from Bacillus cereus. NESGC target BcR13.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoribosyl-ATP diphosphatase activity 3.62350723585237 bayes_pls_golite062009
phosphoribosyl-AMP cyclohydrolase activity 2.54150905806868 bayes_pls_golite062009
catalytic activity 0.634427093790328 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.324592130011053 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle