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View Structure Prediction Details

Protein: his7
Organism: Schizosaccharomyces pombe
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for his7.

Description E-value Query
Range
Subject
Range
gi|49085660, gi|... - gi|67517033|ref|XP_658401.1| hypothetical protein AN0797.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
421.0 [0..1] [411..1]
gi|67787, gi|224... - pir||SHNC phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / phosphoribosyl-ATP diphosphatase (EC 3.6...
414.0 [0..17] [414..25]
HIS2_NEUCR - Histidine biosynthesis trifunctional protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / ...
HIS2_NEUCR - Histidine biosynthesis trifunctional protein OS=Neurospora crassa GN=his-3 PE=3 SV=3
403.0 [0..17] [403..25]
gi|39951333, gi|... - gi|39951333|ref|XP_363383.1| hypothetical protein MGG_01309 [Magnaporthe grisea 70-15], gb|EAA55658....
398.0 [0..1] [403..5]
gi|114197605, gi... - gi|115492235|ref|XP_001210745.1| histidinol dehydrogenase [Aspergillus terreus NIH2624], gi|11419760...
388.0 [0..1] [403..1]
gi|2623127 - gi|2623127|gb|AAC53724.1| histidinol dehydrogenase [Expression vector pIB4]
gi|2623118 - gi|2623118|gb|AAC53718.1| histidinol dehydrogenase [Expression vector pIB1]
gi|2623121 - gi|2623121|gb|AAC53720.1| histidinol dehydrogenase [Expression vector pIB2]
gi|2623124 - gi|2623124|gb|AAC53722.1| histidinol dehydrogenase [Expression vector pIB3]
386.0 [0..7] [408..3]
gi|3203 - gi|3203|emb|CAA39641.1| histidinol dehydrogenase; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-...
386.0 [0..7] [408..3]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLPFFDLT NFESDASEEL GWLKYVGRVQ TRVFPQHFKD NLEKVRKISE TIDVIVDTTA  60
   61 ELGPEACVNL LNAGALAILV NEEMLNELAD ISPNRLVLKT DTTDIGKIEK LSQVAGSIQW 120
  121 IGSAENYPPD FFERASKIIH KAVMPEGGGR TLYLEFPEQP SMEVLKSFSV HSVVPVLSSS 180
  181 FLTVKPAEEP KKLSLADLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LISANTDRED GLFSTLVVNE LGIALGLVYS SKESVAESLK TGTGVYQSRK RGLWYKGASS  60
   61 GAVQHLIHID VDCDEDCLRF VVYQTGKGFC HLDTLHCFGQ A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 1zpsA
Description: Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoribosyl-AMP cyclohydrolase activity 4.07350794147607 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.83474502448328 bayes_pls_golite062009
catalytic activity 1.02941336036162 bayes_pls_golite062009
cyclohydrolase activity 0.335226474674779 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.0625072987078716 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [301-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLCQLEKTL IDRKNNAPEG SYTARLFSDP KLLRAKIMEE AEELCDATTK ENVIWEMADL  60
   61 MYFAITRCVG SGVSLNDISR HLDLKHRKVT RRKGDAKVAW QEKLKDKGGV ANTSYTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1yvwA
Description: Crystal structure of Phosphoribosyl-ATP pyrophosphohydrolase from Bacillus cereus. NESGC target BcR13.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoribosyl-ATP diphosphatase activity 3.62350723585237 bayes_pls_golite062009
phosphoribosyl-AMP cyclohydrolase activity 2.54150905806868 bayes_pls_golite062009
catalytic activity 0.634427093790328 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.324592130011053 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle