| Protein: | moc3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 497 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for moc3.
| Description | E-value | Query Range |
Subject Range |
|
|
167.0 | [0..21] | [472..3] |
|
|
155.0 | [0..134] | [469..255] |
|
|
139.0 | [0..11] | [418..412] |
|
|
139.0 | [0..4] | [355..36] |
|
|
137.0 | [0..16] | [479..1] |
|
|
136.0 | [0..2] | [355..36] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MKRNRTGSIN SNPLYIPNPN VEPTPKPTKR RTKTGCLTCR RRRIKCDETK PFCLNCTKTN 60
61 RECEGYPNSA AQMQAMGSVS PPELSVHSAQ QPLIPTS
|
| Detection Method: |  |
| Confidence: | 10.09691 |
| Match: | 1qp9A |
| Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [98-200] |
1 11 21 31 41 51
| | | | | |
1 IASSSAQTGD TFSGSSQSNF NTNDLNQMTS SSNLSTVTPI KQDHQKPMNL QGFPSAYQQH 60
61 QYLQSNHNVP TNNSSSATSS TKPSVQSVGQ ASYPFLSSVS NFP
|
| Detection Method: | |
| Confidence: | 2.36 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.34861813464065 | bayes_pls_golite062009 |
| DNA binding | 4.03985756894684 | bayes_pls_golite062009 |
| nucleic acid binding | 3.97978190843512 | bayes_pls_golite062009 |
| transcription factor activity | 2.87348461329489 | bayes_pls_golite062009 |
| binding | 2.82809978070212 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.80191339934741 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.67344049333457 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.50774349911815 | bayes_pls_golite062009 |
| transcription activator activity | 0.822069987038721 | bayes_pls_golite062009 |
|
Region A: Residues: [201-314] |
1 11 21 31 41 51
| | | | | |
1 SNFNSELFPF YFHDVVPSIC AFEFDNNIAL HFWSVTVPQF AQSMPCIANS LMAFASIKKL 60
61 DVFGAYSHLT RALRCPMPGP NSFEYLLVSA FLTLTQLNLP AYDLNFCNNF IRKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [315-497] |
1 11 21 31 41 51
| | | | | |
1 SWSSSTKSNY VSLLIAMVVR ELVFAILPRG CIWGFNGKPL SEVSVSRSHA PVSDSLFTIG 60
61 LDILSQPTLS DDLHRERMVA WRDEYHVHLY SASRSPLTKV IDCVGHAVTK NNNDVLSGLQ 120
121 QLMQEECTDI AVLRTSYLCV LSLQNVFASN SKEFKLRAQI ESHFGRLMLE HFMDCNVLNR 180
181 PVL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.890 | 0.020 | ascospore formation | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
