| Protein: | uba5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for uba5.
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..6] | [500..11] |
|
|
413.0 | [0..6] | [500..8] |
|
|
413.0 | [0..6] | [500..9] |
|
|
412.0 | [0..6] | [500..9] |
|
|
409.0 | [0..6] | [500..9] |
|
|
408.0 | [0..6] | [500..9] |
|
Region A: Residues: [1-500] |
1 11 21 31 41 51
| | | | | |
1 MGTSAKMQKY DRQVRLWKAE GQNAIEKSHV CLLYANTVGC EALKNLILPG IGSFAVVDDT 60
61 SVDFSMDGMN FFIQYDQEGK SRARCTASLL QQLNPNVEME YLEMSPEALI DKNIEYFSKF 120
121 SVVLSSNLKE KPLFRLEEYL RSHKIPLLHF NSVGFAGILR ISTHEYTTTQ SQPELPQDLR 180
181 LKNPWPELIN YVKSMDLDNM DSSSLSEIPY IVLIIHVLLK VSPAHAQNSQ EADDCAMFRK 240
241 IMEEYKGKCD SENIEEASSN SWKAFKEYKL PSNVYEVLHD TRCVKIQEDS ESFWIMAHCL 300
301 KMFYDETEFL PLSGLLPDMN CSTQQYVKLQ VIYKEKSEND ILKFKKYVQQ TLKRLNRSVE 360
361 EITDLEIKHF SRNCLNIKVM DFKTMKEEYQ PTSNSAFRIY DTILEKHGKN YKEAFSDTTK 420
421 TISVAQSFLS QIGLEKFFDV VYTAIQELER ADGHELHSIS SFIGGIVAQE TIKLLAQQYL 480
481 PLNNTFVFDG VHSRTETFKL
|
| Detection Method: |  |
| Confidence: | 116.0 |
| Match: | 1tt5A |
| Description: | Structure of APPBP1-UBA3-Ubc12N26: a unique E1-E2 interaction required for optimal conjugation of the ubiquitin-like protein NEDD8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small protein activating enzyme activity | 5.883593664369 | bayes_pls_golite062009 |
| NEDD8 activating enzyme activity | 4.6334061288737 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.84216910649062 | bayes_pls_golite062009 |
| binding | 1.66028321721112 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.63522698057369 | bayes_pls_golite062009 |
| protein binding | 1.40907622346701 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.31244773198273 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.27535252106053 | bayes_pls_golite062009 |
| catalytic activity | 1.22201444897049 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 1.11310449351601 | bayes_pls_golite062009 |
| transcription regulator activity | 0.995905648772847 | bayes_pls_golite062009 |
| transferase activity | 0.680338489823338 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.302798969355962 | bayes_pls_golite062009 |
| URM1 activating enzyme activity | 0.207228630005671 | bayes_pls_golite062009 |
