| Protein: | gaa1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 581 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gaa1.
| Description | E-value | Query Range |
Subject Range |
|
|
617.0 | [0..3] | [549..5] |
|
|
616.0 | [0..3] | [549..26] |
|
|
605.0 | [0..3] | [570..4] |
|
|
599.0 | [0..3] | [570..4] |
|
|
586.0 | [0..3] | [570..4] |
|
|
585.0 | [0..3] | [570..4] |
|
|
583.0 | [0..3] | [570..4] |
|
|
582.0 | [0..3] | [570..4] |
|
|
582.0 | [0..3] | [570..4] |
|
Region A: Residues: [1-399] |
1 11 21 31 41 51
| | | | | |
1 MSLFTFVQIR VFPFLQRHLF FLQLSLTLIG LSWIFILPRN EIIDRLHVSE SALLPGQVNT 60
61 YFENRYSKTV SSSLTAANTW SHLDASVGTN TMYDDLEQIF TAMGLPTQKQ NYSINIPGSE 120
121 FNGSNFITTL RAPRGDATES LLLCVPWKDH IGQYNEAGVA LAISLLKYFQ GWSLWSKDII 180
181 LVIFDDPVYG PSSFLTSYFD QTTPYISYTP LKIRSGSIQA GLSLELVTTE NNSDVLEVLY 240
241 QATNGQLPNL DLFNTISRIF MQHFNYPLRL QGYDFHANSG SSYTSRLKSL WMGMLTQAVS 300
301 NVTSAHALFP QYRIDMLTLR MKVKDPFSFD MFRFGQAIES TFRSLNNLLE HLHQSFFFYF 360
361 ILDHLHFISI GNYMPSILIL AASFMLGAYR HWINHEKKI
|
| Detection Method: |  |
| Confidence: | 2.42 |
| Match: | 1cp7A |
| Description: | Aminopeptidase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 1.72000211894151 | bayes_pls_golite062009 |
| catalytic activity | 1.30073863026596 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.04545175523841 | bayes_pls_golite062009 |
| binding | 0.768831715417683 | bayes_pls_golite062009 |
| peptidase activity | 0.700635398774672 | bayes_pls_golite062009 |
| nucleic acid binding | 0.362145256746391 | bayes_pls_golite062009 |
| metallopeptidase activity | 0.177551285129758 | bayes_pls_golite062009 |
| transcription regulator activity | 0.171364523459 | bayes_pls_golite062009 |
| DNA binding | 0.0535456396545306 | bayes_pls_golite062009 |
|
Region A: Residues: [400-581] |
1 11 21 31 41 51
| | | | | |
1 DLWRPFSFWL FSIFCTIAAY YLVSSSTKIT VFIFLYLMLT FIGIIFSTFM TSEDAELVLS 60
61 YDLMSKSLFI SVVSTLNFSL SFVVAILLVP LQFISFRFNR RLSLLFAVLT YFSTFIFLCS 120
121 LSKILNGPLV PFWLWAKEYE LFNSWLMPSV FMILVLPEII FSVTSFFSLW NEPSVKTKTK 180
181 TL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
