| Protein: | SPBP8B7.23 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 673 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP8B7.23.
| Description | E-value | Query Range |
Subject Range |
|
|
380.0 | [0..17] | [649..2] |
|
|
372.0 | [0..13] | [646..3] |
|
|
346.0 | [0..17] | [649..2] |
|
|
333.0 | [0..36] | [671..55] |
|
|
328.0 | [0..11] | [648..3] |
|
|
328.0 | [0..25] | [668..52] |
|
|
320.0 | [0..14] | [654..14] |
|
|
300.0 | [0..6] | [609..4] |
|
|
297.0 | [0..6] | [655..2] |
|
|
291.0 | [0..57] | [642..16] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MLNGEKSALG EMPSNSNSSS KLNAKSPNFI PSSSNIPRSS AKTKEHSADR KPHRNSEKKT 60
61 QGMPRKNQQL ASSERKTKNK KRLEKQSSAI ADSIGESLDD PQTVYDEHLF DILSARTNKR 120
121 GQINLNHLLN FQFTPRTNSN AFSAPPRRSR GYNTYGQGSG HHPMDKSRYV NANYRFVVSP 180
181 IGDYQSQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [188-257] |
1 11 21 31 41 51
| | | | | |
1 KLDPDSPVKW EDVWQVLCSS DFQLAACPFC LEEKPVAARM SRCGHVYCFS CLLRFVETPT 60
61 AAEVKAAETS
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [258-587] |
1 11 21 31 41 51
| | | | | |
1 GTKIVKCGHR SCPICWDSIR LRDVHPIRWV EDKEFQKLEE GKSVCLRLYQ RNNGSILAFP 60
61 RSCRSFALDG SFHSDEIPNF TMSGAAYARI IIGSHDYMVQ QHLLEIEQLQ QIAAEDISLY 120
121 GSADTYYERI TQILLDRISS LSESVNEQNI KSLQTDIDNL CLQSNSLKQL SEVDDLNDVS 180
181 GSEIADAYLF YQPFAHSHIY LSPLDIRILK SAFGSYENFP DELVPRVERI SSGHLVNSEL 240
241 RQRFKYMAHL PEGCEVAFIE CDWSKIIPKE VLLTFKSEIS KRRKQRKAQE MREERYRQRA 300
301 ERDTEEQIYS ELNMQRPVPK TVVHEDPAEA
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [588-673] |
1 11 21 31 41 51
| | | | | |
1 FPTLGSHHQF ESTDEVNTDE STLSTAKTVW GTRALANIQN DTDDQDDLDG WKVDWDKVAQ 60
61 LSAPSKNSKN KKKKKLVLLS TGAAHR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
