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Protein Overview: SPBP8B7.23

General Information:
Name(s) found: SPBP8B7.23 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • ubiquitin-protein ligase E3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: protein ubiquitination [RCALink to PubMed article]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGEKSALG EMPSNSNSSS KLNAKSPNFI PSSSNIPRSS AKTKEHSADR KPHRNSEKKT  60
   61 QGMPRKNQQL ASSERKTKNK KRLEKQSSAI ADSIGESLDD PQTVYDEHLF DILSARTNKR 120
  121 GQINLNHLLN FQFTPRTNSN AFSAPPRRSR GYNTYGQGSG HHPMDKSRYV NANYRFVVSP 180
  181 IGDYQSQKLD PDSPVKWEDV WQVLCSSDFQ LAACPFCLEE KPVAARMSRC GHVYCFSCLL 240
  241 RFVETPTAAE VKAAETSGTK IVKCGHRSCP ICWDSIRLRD VHPIRWVEDK EFQKLEEGKS 300
  301 VCLRLYQRNN GSILAFPRSC RSFALDGSFH SDEIPNFTMS GAAYARIIIG SHDYMVQQHL 360
  361 LEIEQLQQIA AEDISLYGSA DTYYERITQI LLDRISSLSE SVNEQNIKSL QTDIDNLCLQ 420
  421 SNSLKQLSEV DDLNDVSGSE IADAYLFYQP FAHSHIYLSP LDIRILKSAF GSYENFPDEL 480
  481 VPRVERISSG HLVNSELRQR FKYMAHLPEG CEVAFIECDW SKIIPKEVLL TFKSEISKRR 540
  541 KQRKAQEMRE ERYRQRAERD TEEQIYSELN MQRPVPKTVV HEDPAEAFPT LGSHHQFEST 600
  601 DEVNTDESTL STAKTVWGTR ALANIQNDTD DQDDLDGWKV DWDKVAQLSA PSKNSKNKKK 660
  661 KKLVLLSTGA AHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 1.120978 View MSA. No confident structure predictions are available.
    2 View Details [188..257] PSI-BLAST 14.0 RAG1 DIMERIZATION DOMAIN
    3 View Details [258..587] PSI-BLAST 7.522879 Heavy meromyosin subfragment
    4 View Details [588..673] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle