| Protein: | prp17 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prp17.
| Description | E-value | Query Range |
Subject Range |
|
|
470.0 | [0..13] | [558..1176] |
|
|
457.0 | [0..17] | [558..956] |
|
|
455.0 | [0..52] | [558..570] |
|
|
455.0 | [0..9] | [558..1086] |
|
Region A: Residues: [1-469] |
1 11 21 31 41 51
| | | | | |
1 MLVANYSSDS EEQENSQSPN IQPLLHTENL APAVVDNVKD DLIVSKGGNS RELARNVPVN 60
61 EMVQPALGPA NPFVTKEQDS IKNSITGYAE REYVPNFVFN QEYYANTHAI YGKRNFDDNE 120
121 ATTSTDLKRK SQKIKERRED PGDPSILEGD GAYKGPWAGY GSEQSSSPLE YSEYEEVESL 180
181 DVKSEKDTES NNLGQNELLK EQLATPEVET HRSKEETILH KDRLFDYQNR SYMHVPNDVG 240
241 INLSEEPGEQ TCYIPKKHIF TWKGHTKGIS CLRFFPISGH LLLSGSMDNQ IKIWEVYHDR 300
301 SLLRTFQGHA RPIRDLSFSQ DGRSFLSTSF DKTIKLWDTE LGKCLNCFNS DRLTNCVKFQ 360
361 VDPDKPNEFL AGTADKRILQ FDIRSPDIVQ AYDHHLGGIN SITFLENGKR FVTTSDDSSM 420
421 RFWEYGTPVP IKFVADIAMH SMPRVALRPN GKSIACQSLD NCIYVYSAY
|
| Detection Method: |  |
| Confidence: | 59.154902 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 6.67009948605948 | bayes_pls_golite062009 | |
| snoRNA binding | 4.78410616474982 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| GTPase activity | 3.23750443966606 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| nucleic acid binding | 1.2886835964948 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.26395898062853 | bayes_pls_golite062009 |
| transcription regulator activity | 1.25687092973217 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 1.11754260203517 | bayes_pls_golite062009 |
| actin binding | 1.08902852052152 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| transporter activity | 0.807925044108643 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| DNA binding | 0.561578774129549 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.428715007921149 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.414491774707324 | bayes_pls_golite062009 |
| transcription factor activity | 0.243992994917491 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
|
Region A: Residues: [470-558] |
1 11 21 31 41 51
| | | | | |
1 EKYRQNKKKV FKGYSCSGYS LEVGFSPDGR FVFSGDSSGN ACFWDWKTCK LMAKLPAHSG 60
61 PVQSMAFHPQ ETSKVATSSI VDGSIKYWD
|
| Detection Method: | |
| Confidence: | 61.69897 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
