| Protein: | SPBC3E7.11c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 355 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC3E7.11c.
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..5] | [354..2] |
|
|
283.0 | [0..5] | [349..2] |
|
|
281.0 | [0..5] | [349..2] |
|
|
268.0 | [0..7] | [355..6] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MVQRVVDRDY YDILNISVDA DGDTIKKSYR RLAILYHPDK NRENPEAARE KFQKLAEAYQ 60
61 VLSDPKLREK YDKLGKVGAV PDAGFEDAFE FFKNLFGGDS FRDYVGELNL LKELCKMINE 120
121 EPELKAIEDT EESKKQLQRE ESKEADRLLQ ERIDVLCKNL LDKLSIWTET DMSDR
|
| Detection Method: |  |
| Confidence: | 24.39794 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| binding | 2.03854863870179 | bayes_pls_golite062009 |
| chaperone binding | 1.61155546076854 | bayes_pls_golite062009 |
| protein binding | 0.912937133925792 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| nucleic acid binding | 0.423488346839872 | bayes_pls_golite062009 |
| transcription regulator activity | 0.146399219759372 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| DNA binding | 0.10307408349439 | bayes_pls_golite062009 |
|
Region A: Residues: [176-266] |
1 11 21 31 41 51
| | | | | |
1 VTDAFKQKMQ FEAELLKDES FGNEMLHAIG STYVQRANIL IQSQSFLGIR GVWGSLCAKG 60
61 TLLKDTWNTV VSAVDVQSSA AALAKAEEGE E
|
| Detection Method: | |
| Confidence: | 12.09691 |
| Match: | 2d9oA |
| Description: | No description for 2d9oA was found. |
|
Region A: Residues: [267-355] |
1 11 21 31 41 51
| | | | | |
1 QWSKEKRDEA ARELTGKVLS ATWKGTRFEV QSVIRTVSDK ILYDKAVPLE KRINRANALL 60
61 MIGQVFLKVA PNEKSDANYF EDLMNDRGK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
