| Protein: | cnp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 120 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cnp1.
| Description | E-value | Query Range |
Subject Range |
|
|
194.0 | [0..2] | [119..70] |
|
|
189.0 | [0..2] | [119..232] |
|
|
187.0 | [0..2] | [119..646] |
|
|
187.0 | [0..2] | [119..56] |
|
|
185.0 | [0..2] | [119..26] |
|
|
183.0 | [0..2] | [119..71] |
|
|
183.0 | [0..2] | [119..26] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MAKKSLMAEP GDPIPRPRKK RYRPGTTALR EIRKYQRSTD LLIQRLPFSR IVREISSEFV 60
61 ANFSTDVGLR WQSTALQCLQ EAAEAFLVHL FEDTNLCAIH AKRVTIMQRD MQLARRIRGA 120
121
|
| Detection Method: |  |
| Confidence: | 45.39794 |
| Match: | 1aoiA |
| Description: | Histone H3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 4.57339366278729 | bayes_pls_golite062009 |
| DNA binding | 4.49118409263799 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35201412176948 | bayes_pls_golite062009 |
| transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
| binding | 3.27510691458843 | bayes_pls_golite062009 |
| centromeric DNA binding | 2.60445660474495 | bayes_pls_golite062009 |
| transcription factor activity | 2.51581622888695 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.38228606466152 | bayes_pls_golite062009 |
| transcription repressor activity | 2.3574713307436 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.30859203490073 | bayes_pls_golite062009 |
| transcription activator activity | 1.25487495162413 | bayes_pls_golite062009 |
| transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
| protein binding | 1.07873333188144 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.725138319268162 | bayes_pls_golite062009 |
| histone binding | 0.218942897869955 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.0885263144317296 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0852726470007639 | bayes_pls_golite062009 |
