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View Structure Prediction Details

Protein: ppk26
Organism: Schizosaccharomyces pombe
Length: 589 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppk26.

Description E-value Query
Range
Subject
Range
gi|83286005 - gi|83286005|ref|XP_729972.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23489282 - gi|23489282|gb|EAA21537.1| Plasmodium falciparum CDPK2 protein [Plasmodium yoelii yoelii]
225.0 [0..132] [578..21]
CDPKY_ARATH - Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1
223.0 [0..163] [586..3]
gi|92874033, gi|... - gi|92874033|gb|ABE82358.1| EPS15 homology (EH); Protein kinase [Medicago truncatula], gi|92867373|gb...
222.0 [0..163] [586..3]
gi|84626055 - gi|84626055|gb|ABC59619.1| calcium-dependent protein kinase [Triticum aestivum]
221.0 [0..147] [586..4]
gi|55297649, gi|... - gi|55297649|dbj|BAD68220.1| putative calcium-dependent protein kinase [Oryza sativa Japonica Group],...
220.0 [0..168] [586..1]

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Predicted Domain #1
Region A:
Residues: [1-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVRKNSPAS PKPTSRSRES SRSPSVTDLK DHSKAKRTLC RNILLYGSCK HSENGCAFRH  60
   61 DGPFIPSSEN LEQYSVKKKL NAASASFQPV RALPVKAAGA AVFVPKSQEK SLFLSRERTP 120
  121 VALSPGSHAI NPYNNASMLV NEPFHDDSGV YYTRQNQFKP TLYNLYNPQP SPMPTLLPYE 180
  181 RTVNGLFIDD TTRERIERKS EASRQTISAL PSIISSYTSL APLNTKLYRY KEQIGFSSWT 240
  241 YKCTSSIDGN AYVLKRLQDC SINIDTSTVD KLKNVFHPNI VPFHSAFHTD TFHDSSLLLI 300
  301 YDFYPCTTTL GELYLNNSKN SVKLEENRKI PERELWNYFF QLTIALSYLH KSGFACNKLT 360
  361 PSRILVDQTE RIRISGCADY ELVVSNKPPL EERKKQDFVD LGVVIANLAT GRTDMDMSSA 420
  421 ARAIYSTYSR EFYKAVLYFV SEVPEDKNLE LFLQNHIESF FPIMS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.154902
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 2.32531951245217 bayes_pls_golite062009
protein kinase activity 2.28862009982746 bayes_pls_golite062009
kinase activity 2.161759445077 bayes_pls_golite062009
binding 2.15579529579992 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.11128976205756 bayes_pls_golite062009
transferase activity 1.80001061545783 bayes_pls_golite062009
protein serine/threonine kinase activity 1.76101721812142 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
protein binding 0.973296165626155 bayes_pls_golite062009
molecular adaptor activity 0.917765749936842 bayes_pls_golite062009
RNA binding 0.892334734235538 bayes_pls_golite062009
SH3/SH2 adaptor activity 0.880781378520002 bayes_pls_golite062009
protein binding, bridging 0.7618053658574 bayes_pls_golite062009
transcription regulator activity 0.463264466764216 bayes_pls_golite062009
nucleic acid binding 0.363413065857089 bayes_pls_golite062009
DNA binding 0.347750642152652 bayes_pls_golite062009
transcription factor activity 0.265590485407466 bayes_pls_golite062009
ATP binding 0.0978219864504931 bayes_pls_golite062009
adenyl ribonucleotide binding 0.0611476803427368 bayes_pls_golite062009
adenyl nucleotide binding 0.050750946930082 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [466-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPYVECEKME RKISDAFQHG RFFNILCKIM FIIDNNRASR EYPIAREKEI SLIYLLRDYL  60
   61 FHQIDEDECP VIDLYQVLNR LGKLDAGINQ AIALISRDEL DCVSVSYGEL KAWLDNVYEM 120
  121 EINS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 2acxA
Description: No description for 2acxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle