| Protein: | spt16 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1019 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spt16.
| Description | E-value | Query Range |
Subject Range |
|
|
1027.0 | [0..2] | [1019..3] |
|
|
1015.0 | [0..1] | [1019..1] |
|
|
1009.0 | [0..1] | [1017..1] |
|
|
1004.0 | [0..1] | [1019..1] |
|
|
1003.0 | [0..3] | [1018..4] |
|
|
1002.0 | [0..4] | [1003..101] |
|
|
997.0 | [0..2] | [1019..3] |
|
|
994.0 | [0..4] | [1003..3] |
|
|
994.0 | [0..4] | [1003..3] |
|
Region A: Residues: [1-440] |
1 11 21 31 41 51
| | | | | |
1 MAEYEIDEIT FHKRLGILLT SWKNEEDGKT LFQDCDSILV TVGAHDDTNP YQKSTALHTW 60
61 LLGYEFPSTL ILLEKHRITI LTSVNKANML TKLAETKGAA ADVNILKRTK DAEENKKLFE 120
121 KIIEYIRATN KKVGVFPKDK TQGKFINEWD SIFEPVKSEF NLVDASLGLA KCLAIKDEQE 180
181 LANIKGASRV SVAVMSKYFV DELSTYIDQG KKITHSKFSD QMESLIDNEA FFQTKSLKLG 240
241 DIDLDQLEWC YTPIIQSGGS YDLKPSAITD DRNLHGDVVL CSLGFRYKSY CSNVGRTYLF 300
301 DPDSEQQKNY SFLVALQKKL FEYCRDGAVI GDIYTKILGL IRAKRPDLEP NFVRNLGAGI 360
361 GIEFRESSLL VNAKNPRVLQ AGMTLNLSIG FGNLINPHPK NSQSKEYALL LIDTIQITRS 420
421 DPIVFTDSPK AQGDISYFFG
|
| Detection Method: |  |
| Confidence: | 80.69897 |
| Match: | 1a16A |
| Description: | AMINOPEPTIDASE P FROM E. COLI WITH THE INHIBITOR PRO-LEU |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.3228898238998 | bayes_pls_golite062009 |
| DNA binding | 1.6830709273154 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67660713848062 | bayes_pls_golite062009 |
| binding | 1.4562583231987 | bayes_pls_golite062009 |
| transcription factor activity | 1.02226978078776 | bayes_pls_golite062009 |
| protein binding | 0.170797254754318 | bayes_pls_golite062009 |
| catalytic activity | 0.148551873544128 | bayes_pls_golite062009 |
|
Region A: Residues: [441-525] |
1 11 21 31 41 51
| | | | | |
1 EDDSSLEDGV KPRKPPTRGT ATISSHKGKT RSETRDLDDS AEKRRVEHQK QLASRKQAEG 60
61 LQRFAQGSVP SSGIEKPTVK RFESY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [526-644] |
1 11 21 31 41 51
| | | | | |
1 KRDSQLPQAI GELRILVDYR AQSIILPIFG RPVPFHISTL KNASKNDEGN FVYLRLNFVS 60
61 PGQIGGKKDE LPFEDPNAQF IRSFTFRSSN NSRMSQVFKD IQDMKKAATK RETERKEFA
|
| Detection Method: | |
| Confidence: | 36.39794 |
| Match: | PF08644.2 |
| Description: | No description for PF08644.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [645-923] |
1 11 21 31 41 51
| | | | | |
1 DVIEQDKLIE IKNKRPAHIN DVYVRPAIDG KRLPGFIEIH QNGIRYQSPL RSDSHIDLLF 60
61 SNMKHLFFQP CEGELIVLIH VHLKAPIMVG KRKTQDVQFY REVSDIQFDE TGNKKRKYMY 120
121 GDEDELEQEQ EERRRRAQLD REFKSFAEKI AEASEGRIEL DIPFRELAFN GVPFRSNVLL 180
181 QPTTDCLVQL TDTPFTVITL NEIEIAHLER VQFGLKNFDL VFIFQDFRRP PIHINTIPME 240
241 QLDNVKEWLD SCDICFYEGP LNLNWTTIMK TVNEDPIAF
|
| Detection Method: | |
| Confidence: | 0.965 |
| Match: | 2gcjA |
| Description: | No description for 2gcjA was found. |
|
Region A: Residues: [924-1019] |
1 11 21 31 41 51
| | | | | |
1 FEEGGWGFLG APSDDEGDDS VEEVSEYEAS DADPSDEEEE ESEEYSEDAS EEDGYSESEV 60
61 EDEESGEDWD ELERKARQED AKHDAFEERP SKKRHR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
