| Protein: | SPAC1399.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1399.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
224.0 | [0..2] | [497..31] |
|
|
221.0 | [0..132] | [518..140] |
|
|
188.0 | [0..132] | [518..244] |
|
|
183.0 | [0..134] | [508..225] |
|
|
180.0 | [0..230] | [510..27] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MGEVERTRQS SSSLLTFKRK RALEACDSCR KQKTRCLAGS VEDENRACLR CRSLNMDCSL 60
61 ADPNHFIRKV ENDNMDAISA NINSKLENRL KVLEKAISSI TNSPIAGQIS LKSEKDVF
|
| Detection Method: |  |
| Confidence: | 4.154902 |
| Match: | 2er8A |
| Description: | No description for 2er8A was found. |
|
Region A: Residues: [119-183] |
1 11 21 31 41 51
| | | | | |
1 LQGLLSMDEI ELLLEIFIER YGKRWLSVDY SASQYMELLY TKSHLMLATA CLIALRHNPS 60
61 LKARI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [184-529] |
1 11 21 31 41 51
| | | | | |
1 YTDVLNIVDR LISEELLTTS PSLQFFEAVS MLTLYRPLRL SQKQDLWLLS GFALQHRTLS 60
61 STKGWFNGFA GSSATLTYLD IVPARTWNHL CHGHLVMCMG YRRHAMLDEN TFDDCRNILT 120
121 NTKANEFDGN ILGMLSVYSM LYRMLRSPTL DLDYAIFQLE EWRKEWCHLW EQPEPQYSRI 180
181 AYFYSYNVVY EASIQTATDG NDFANIPRYV SMVQSYALKT IDAIFELSAY DMSRCSDHVL 240
241 FHAGFASASL LRLIYAAKTK EVDTSIVQPK VLNDLVTKIW KWLLVISVDQ YHLATKFANY 300
301 LKEYQKTVNE GTAESTWFKG PLRPVSSTTL QALKPYNLGV ATVERG
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1kxuA |
| Description: | CYCLIN H, A POSITIVE REGULATORY SUBUNIT OF CDK ACTIVATING KINASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.75688185850223 | bayes_pls_golite062009 |
| binding | 2.37916921859542 | bayes_pls_golite062009 |
| nucleic acid binding | 2.06743451505655 | bayes_pls_golite062009 |
| DNA binding | 1.95321993038755 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 1.41497909264171 | bayes_pls_golite062009 |
| protein binding | 1.37207701115974 | bayes_pls_golite062009 |
| transcription factor activity | 1.22628491144894 | bayes_pls_golite062009 |
| protein kinase regulator activity | 1.21941169140389 | bayes_pls_golite062009 |
| kinase regulator activity | 1.18590233040331 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.962670695182671 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.797465164318676 | bayes_pls_golite062009 |
| transcription factor binding | 0.655253705928308 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.461517963237846 | bayes_pls_golite062009 |
| transcription activator activity | 0.0606514459376675 | bayes_pls_golite062009 |
