| Protein: | hem1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hem1.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..10] | [555..9] |
|
|
354.0 | [0..11] | [555..5] |
|
|
354.0 | [0..12] | [555..6] |
|
|
353.0 | [0..11] | [555..10] |
|
|
351.0 | [0..10] | [555..9] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MERVVKLAAK HCPFVSKADP SALRRMAGAG LIRAGARCPV VRHALPVAAA TGADVSRGFK 60
61 SDSKQMAMEP SLDEIHLKAG VVNTGSRTCR HADAVKAAAE AATTTPVTKK HQMPKHYASD 120
121 LNGVGPATTP R
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [132-558] |
1 11 21 31 41 51
| | | | | |
1 FDYDTFYREE LDKKHRDKSY RYFNNINRLA KEYPLAHLAD PNTRVEVWCS NDYLNMGGHK 60
61 KIREAMHQCI ETYGGGAGGT RNIAGHNQHA VRLEKSLADL HQKPAALVFG SCYVANDATL 120
121 STLGRKLPNC IFLSDEMNHA SMINGIRNSR CEKIIFKHND LVDLEAKLAS LPLNRPKIIA 180
181 FESVYSMSGN VAPISEICDL AKKYGAITFL DEVHAVGMYG PRGAGVAEET PGLLSRVDII 240
241 TGTLAKSYGC VGGYIAASST LVDMIRSLAP GFIFTTSLPP HVMVGALTAV EHLKVSNVER 300
301 EQQRSAVRRV KQSLSEIGIP VLSNDTHIVP AMVGDAHLAK LASDSLLHDH NIYVQSINFP 360
361 TVSVGTERLR ITPTPAHNTE HYVQSLTNAM NDVWSKFNIN RIDGWEKRGI DVGRLCKFPV 420
421 LPFTTTH
|
| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 2bwnA |
| Description: | 5-Aminolevulinate Synthase from Rhodobacter capsulatus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-aspartate:2-oxoglutarate aminotransferase activity | 3.359406422625 | bayes_pls_golite062009 |
| 5-aminolevulinate synthase activity | 3.15163480353521 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| N-succinyltransferase activity | 1.81799375593294 | bayes_pls_golite062009 |
| threonine aldolase activity | 1.80396420390785 | bayes_pls_golite062009 |
| adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 1.74778109525713 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 1.63055151623667 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 1.63055151623667 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 1.19150094103499 | bayes_pls_golite062009 |
| glycine C-acetyltransferase activity | 0.935794708043259 | bayes_pls_golite062009 |
| transferase activity | 0.737426388870721 | bayes_pls_golite062009 |
| carbon-sulfur lyase activity | 0.698312655247044 | bayes_pls_golite062009 |
| vitamin binding | 0.66463470119531 | bayes_pls_golite062009 |
| intramolecular transferase activity, transferring amino groups | 0.659071155545801 | bayes_pls_golite062009 |
| binding | 0.462716421837165 | bayes_pls_golite062009 |
| cystathionine beta-lyase activity | 0.15938456446406 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0776397323445919 | bayes_pls_golite062009 |
| sulfurtransferase activity | 0.0450490929307473 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0150950313851779 | bayes_pls_golite062009 |
