| Protein: | vps27 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 610 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vps27.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..4] | [558..1] |
|
|
331.0 | [0..1] | [546..1] |
|
|
329.0 | [0..4] | [556..1] |
|
|
326.0 | [0..1] | [501..1] |
|
|
322.0 | [0..4] | [556..1] |
|
|
322.0 | [0..4] | [556..1] |
|
|
321.0 | [0..4] | [556..1] |
|
|
320.0 | [0..4] | [556..1] |
|
|
320.0 | [0..4] | [556..1] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MSRWWNSNSQ FASDIEKATS ETLPAGSEEI SLYLEISDQI RSKSVDPKFA MRILKSRIDH 60
61 SNPNVQIMAL KLTDTCVKNG GSGFLLEIAS REFMDNLVSI LRSPAGIDED VKMVILRYIQ 120
121 SWALAVPDTN SPLSYIIHVY QNLKDGDYEF PEPSQNITSK FLDTETPPDW TDSEVCLRCR 180
181 TPFTFTNRKH HCRNCGGVFC NQCSSKTLSL PHLGINQPVR VCDSCYSLRT KPKGSKSR
|
| Detection Method: |  |
| Confidence: | 49.045757 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.73567588815578 | bayes_pls_golite062009 |
| clathrin binding | 2.70535896247543 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.5307798253901 | bayes_pls_golite062009 |
| phospholipid binding | 1.34712325037196 | bayes_pls_golite062009 |
| transporter activity | 1.32696426532114 | bayes_pls_golite062009 |
| protein binding | 1.32366404206022 | bayes_pls_golite062009 |
| nucleic acid binding | 1.01735624308761 | bayes_pls_golite062009 |
| protein transporter activity | 1.0075677188289 | bayes_pls_golite062009 |
| DNA binding | 0.896491359501813 | bayes_pls_golite062009 |
| transcription regulator activity | 0.850897491544184 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.694289284736477 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.679696382592776 | bayes_pls_golite062009 |
| phosphatidylinositol binding | 0.67214549237381 | bayes_pls_golite062009 |
| hydrolase activity | 0.570569488711945 | bayes_pls_golite062009 |
| histone binding | 0.49822123308392 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0943698557209078 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0545685184292493 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0449648841896718 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.04237887650281 | bayes_pls_golite062009 |
|
Region A: Residues: [239-335] |
1 11 21 31 41 51
| | | | | |
1 ARNERKFHAK TRKTPSKPVT NNEDEDIKRA IELSLKEMPQ SREPPSYERP SEANVVISQD 60
61 QHLTEDEDEE LKRAIAISLE EAQKSSQKDD NVTAPNN
|
| Detection Method: | |
| Confidence: | 3.38 |
| Match: | 1q0vA |
| Description: | Solution Structure of Tandem UIMs of Vps27 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-458] |
1 11 21 31 41 51
| | | | | |
1 MNISYPSVPA HTVSTDIRSS PFSGRPSDNP STLISTADAD NITLYATLVQ KLKKLPPGSI 60
61 FTEYQLQELH ENMGVMRTRM MRSLGETMSK YNGLIQALQK LQTCMRLNDA LIEQRLSSTY 120
121 AHH
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 2pjwV |
| Description: | No description for 2pjwV was found. |
|
Region A: Residues: [459-610] |
1 11 21 31 41 51
| | | | | |
1 YIDSSMDSNR SIEPEPDVIS TVRNSSTIPQ ASSSSVPKIV VDSSPVTENP PSHSDVMGQK 60
61 DTISSYYSTD TDVSANVMGN RHDEVVFSDT ASGEKNTKLN IDESTNYYNT DSIDKVGEPF 120
121 DEISSGYDDL MNGNDKQGND IPEVQEASLI EL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
