| Protein: | SPAC1F3.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1F3.05.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..12] | [509..8] |
|
|
350.0 | [0..3] | [509..25] |
|
|
347.0 | [0..7] | [509..38] |
|
|
345.0 | [0..3] | [509..19] |
|
|
342.0 | [0..2] | [510..3] |
|
|
342.0 | [0..5] | [509..24] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MRSSQTLSKY IDKATDQFNL EPNLALNIEI ADLINEKKGN TPREAALLIL KRVNSANPTV 60
61 SYLALHLLDI CVKNCGYPFH FQIASEEFLN GFVSRFPNHP ISRMNKIQSK MLEMLEEWNY 120
121 MLCKNNRHRE DFSRIHDIRE LMAFRGYKFP AVDEDSIAVM
|
| Detection Method: |  |
| Confidence: | 38.0 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 4.42433208284373 | bayes_pls_golite062009 |
| ADP-ribosylation factor binding | 3.85762908083934 | bayes_pls_golite062009 |
| binding | 2.32938736470587 | bayes_pls_golite062009 |
| protein binding | 2.16467447169895 | bayes_pls_golite062009 |
| small conjugating protein binding | 1.40018260535396 | bayes_pls_golite062009 |
| ubiquitin binding | 1.32638202696551 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.87586037360588 | bayes_pls_golite062009 |
| phospholipid binding | 0.84481265656013 | bayes_pls_golite062009 |
| nucleic acid binding | 0.544430532077345 | bayes_pls_golite062009 |
| DNA binding | 0.201426073572255 | bayes_pls_golite062009 |
| lipid binding | 0.176990783274449 | bayes_pls_golite062009 |
| transcription regulator activity | 0.169924567699487 | bayes_pls_golite062009 |
|
Region A: Residues: [161-370] |
1 11 21 31 41 51
| | | | | |
1 KPNNSLRSAQ ELAREDLEAH KAKLQELLRR GTPMDLAEAN ALMKVIAGYD EENTEDYSAL 60
61 AAADLESIRS KALRVKQFLV NQTVSLEEGT LADAVESLKV YQTKIARILR EENEDEYYVQ 120
121 KLLSLNDLLI NVIEECSNSD LIHSGTNVVS SQPNVVESHV PPSSNDTKQE SSLIDLMKLT 180
181 EEPAVPSPSL PTNVPANQSL SMLSSLSNSM
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 1oxzA |
| Description: | ADP-ribosylation factor binding protein Gga1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 5.9355718186759 | bayes_pls_golite062009 |
| binding | 2.19865242653132 | bayes_pls_golite062009 |
| protein binding | 1.957004610117 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.69886980741044 | bayes_pls_golite062009 |
| phospholipid binding | 1.35873451348399 | bayes_pls_golite062009 |
| lipid binding | 0.681936854618139 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 0.2359206178887 | bayes_pls_golite062009 |
| phosphatidylinositol binding | 0.10007172207713 | bayes_pls_golite062009 |
|
Region A: Residues: [371-510] |
1 11 21 31 41 51
| | | | | |
1 SSTSNGALNS PSYSQAAIPN TNSSLTSILQ SDSLMISTQL TSVQKSSGFA SYSVQFSNCS 60
61 LTWPVSEVVF QVAVVKSLKL QLLPHTGDAI IAPGKQNAAH EIMNITNIPA DASDLRIRWR 120
121 VQWIIGTDHR VEQGESHLPL
|
| Detection Method: | |
| Confidence: | 28.39794 |
| Match: | 1gyuA |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.77203848422196 | bayes_pls_golite062009 |
| protein binding | 1.57801165255065 | bayes_pls_golite062009 |
