| Protein: | kap114 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 986 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kap114.
| Description | E-value | Query Range |
Subject Range |
|
|
466.0 | [0..1] | [983..1] |
|
|
462.0 | [0..1] | [983..1] |
|
|
461.0 | [0..1] | [983..1] |
|
|
460.0 | [0..1] | [983..1] |
|
|
440.0 | [0..1] | [983..1] |
|
|
435.0 | [0..1] | [983..1] |
|
|
434.0 | [0..3] | [983..22] |
|
Region A: Residues: [1-986] |
1 11 21 31 41 51
| | | | | |
1 MVESKIIKLL EQVQSADPNS RIQAELGLRD LEKYHDFAAK LTDIASSGAS VPLRQGSLIY 60
61 LQRYIVHHWS PLFEQFQDGP IPDENVKKHV RETLLHLLVS LDNFTLIKAV AYAVSLIANV 120
121 DYPDEWPEVV PAVLHLLQST NENSINASLD VLDELVDESL VEEQFFIIAP QLASILYQFI 180
181 FSAPPNDSMR MLQARGIKLF RSCLELIEIY KETKAEHVRV FLEQILPPWM DMFSHKFEVS 240
241 LVDDRQVILP DSCGYFCIMG EIAMTLTKLR ELFPSKLTPY VVTFVELVWN IIEKLLDPYI 300
301 REVVFSDGLD DSAFGDKYPI RYLVELLLFV SVALQSKFVQ NLFVSNTVPV PPLPPCIPLL 360
361 VQYTQLPKHQ IEVYESDVSE YIANEFSMDF ASDTVRGAAI SVLSAFEEHT TLPIQQSLRE 420
421 MSATYILNNE INWIYQEALL YACCSVDAAS DDTYDDYLDP IYEAIKVRID YSDAPILLLS 480
481 RFFLFIGYFS ESTVVASQFF QIIMNNLVNA LQVDTVQYAA MKAIERFCSV GKVKPILSLQ 540
541 PMILEVLSQY ASKSSDEALV LLVEAISSAV KLDCAKAAEL GNSVIPLLFN LVATNASDPY 600
601 ICGIIEDTFE DIIHAANNYE SMCEITLPEL LQVLNQEDPI MVNIGATLLS CLIRAGPSPL 660
661 PNGFVGYVLP PVYKITQIHS GDTELLQLSQ EILKGLLEKD TPQLLETEIS GSSGFQYILF 720
721 ILHQLLDKES DDSACFLVGP ILLELADHAS QMVDLQSILL SCIKRLAIAE QPRFIQSIIY 780
781 VFAKLIVKDS LGMMHFLTSS LLNEQGLTAF EVLMTVWCDN FVYFSNFKNI SIICIAMTKI 840
841 YSFDSPLLDS VQVKGELISH SNRIITRSQS KLHPEEYSYV SVGEKILRLL SEEFVSLSKD 900
901 AIVEEVSDDG ADDWDDGPIS AETFGLSAND EFSGVDNSED EDNTDLQFYL LEFFKEAMKS 960
961 NLHNINEVVF RLPQEEQDAL VQIKEK
|
| Detection Method: |  |
| Confidence: | 111.0 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| binding | 3.63805603287848 | bayes_pls_golite062009 |
| transporter activity | 2.92319684675174 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.40193469608002 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.70521460039069 | bayes_pls_golite062009 |
| protein binding | 1.63705839411934 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.6217303285315 | bayes_pls_golite062009 |
| DNA binding | 1.55552983744023 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 1.29390474721722 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.20870827474803 | bayes_pls_golite062009 |
| transcription factor activity | 0.887427876407589 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| mRNA binding | 0.46864854653143 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.106230318891928 | bayes_pls_golite062009 |
