| Protein: | rrp8 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 318 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rrp8.
| Description | E-value | Query Range |
Subject Range |
|
|
184.0 | [0..9] | [318..205] |
|
|
184.0 | [0..8] | [318..166] |
|
|
183.0 | [0..9] | [318..213] |
|
|
183.0 | [0..9] | [318..174] |
|
|
175.0 | [0..18] | [318..2] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MFKVDWDLGP VSKSASDQTK ESRKEKKRKK GERKNVGDKG EKLNEKVLKK AKSVTTNNSL 60
61 KSEIKKEKSV PSIKEKNKGD AKHTKLTSLQ QKMKDKLDGA NFRWINEQLY T
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [112-318] |
1 11 21 31 41 51
| | | | | |
1 TESDKAVQMF KENPDLFDIY HAGFRYQVEG WPENPVDIFI QHLKIRFEHS NAKKKNNIVI 60
61 ADLGCGEAKI ASTFRKSRSL QVHSFDLVAP NEHVVACDIA NVPMADETVD IAVFCLSLMG 120
121 TNWQSFLKEA YRILKVGGLL WVAEIKSRFS DKSGEVFAKE LPKLGFETKS IQLQNKMFTL 180
181 FEFKKVPVHG KCEELPPILS ACIYKRR
|
| Detection Method: | |
| Confidence: | 19.045757 |
| Match: | 1tpyA |
| Description: | Structure of the cyclopropane synthase MmaA2 from Mycobacterium tuberculosis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| S-adenosylmethionine-dependent methyltransferase activity | 3.15840198589582 | bayes_pls_golite062009 |
| methyltransferase activity | 3.08059259177729 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 2.99781997782052 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 2.89157295612945 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 2.57273894921779 | bayes_pls_golite062009 |
| N-methyltransferase activity | 2.26670816231281 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 1.55242772787972 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| rRNA (guanine) methyltransferase activity | 1.21404153202137 | bayes_pls_golite062009 |
| transferase activity | 1.07321114919891 | bayes_pls_golite062009 |
| rRNA (adenine) methyltransferase activity | 1.03293084629981 | bayes_pls_golite062009 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 0.954020631547781 | bayes_pls_golite062009 |
| transcription regulator activity | 0.914549843668268 | bayes_pls_golite062009 |
| DNA binding | 0.86027591375666 | bayes_pls_golite062009 |
| rRNA (uridine) methyltransferase activity | 0.742142092552002 | bayes_pls_golite062009 |
| nucleic acid binding | 0.616949327277483 | bayes_pls_golite062009 |
| RNA binding | 0.417524996559564 | bayes_pls_golite062009 |
| binding | 0.383237930789959 | bayes_pls_golite062009 |
| rRNA (uridine-2'-O-)-methyltransferase activity | 0.15443733645953 | bayes_pls_golite062009 |
