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Protein Overview: RRP8_ARATH

General Information:
Name(s) found: RRP8_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana GN=At5g40530 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTEENKTSR NRKRKRQRNP KPSKEEPIET TPKNQNEKKN QRDTKNQQHG GSSAPSKRPK  60
   61 PSNFLDALRE RLSGGQFRML NEKLYTCSGK EALDYFKEDP QMFDMYHTGY QQQMSNWPEL 120
  121 PVNSIINWLL SNSSSLVVAD FGCGDARIAK SVKNKVFSFD LVSKNPSVIA CDMSNTSLES 180
  181 SSVDVAVFCL SLMGTNYSSY IKEAHRVLRP SGMLLIAEVK SRFDPNNGGA DPKDFVKAVC 240
  241 DLGFTSVLKD FSNKMFILFH FKKKEQMNSN QKIIKWPELK ACLYKRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 12.69897 Crystal structure of Hma (MmaA4) from Mycobacterium tuberculosis, apo-form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle