| Protein: | SPBC12C2.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 642 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC12C2.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..1] | [496..2143] |
|
|
208.0 | [0..8] | [641..10] |
|
|
198.0 | [0..1] | [642..1] |
|
|
195.0 | [0..1] | [642..25] |
|
|
194.0 | [0..7] | [640..6] |
|
|
193.0 | [0..8] | [642..10] |
|
|
192.0 | [0..8] | [640..10] |
|
|
189.0 | [0..25] | [640..18] |
|
Region A: Residues: [1-306] |
1 11 21 31 41 51
| | | | | |
1 MSLETYKFSD ELHDDFKVVD SWINNGAKWL EDIQLYYKER SSIEKEYAQK LASLSNKYGE 60
61 KKSRKSSALS VGDTPAMSAG SLECASLTTW SKILDELTRS SKTHQKLSDD YSLDIAEKLK 120
121 KLESHIEALR KVYDDLYKKF SSEKETLLNS VKRAKVSYHE ACDDLESARQ KNDKYREQKT 180
181 QRNLKLSESD MLDKKNKYLL RMLVYNAHKQ KFYNETLPTL LNHMQVLNEY RVSNLNEIWC 240
241 NSFSIEKSLH DTLSQRTVEI QSEIAKNEPV LDSAMFGRHN SKNWALPADL HFEPSPIWHD 300
301 TDALVV
|
| Detection Method: |  |
| Confidence: | 16.522879 |
| Match: | 2eflA |
| Description: | No description for 2eflA was found. |
| Term | Confidence | Notes |
| cytoskeletal protein binding | 2.86582611923959 | bayes_pls_golite062009 |
| binding | 2.2879693624429 | bayes_pls_golite062009 |
| protein binding | 2.08046860800611 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.533946913012306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.492863553428448 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.48203970262288 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.481384553079895 | bayes_pls_golite062009 |
|
Region A: Residues: [307-365] |
1 11 21 31 41 51
| | | | | |
1 DGSCKNYLRN LLVHSKNDLG KQKGELVSLD SQLEGLRVDD PNSANQSFES KKASINLEG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [366-513] |
1 11 21 31 41 51
| | | | | |
1 KELMVKARIE DLEVRINKIT SVANNLEEGG RFHDFKHVSF KLPTSCSYCR EIIWGLSKRG 60
61 CVCKNCGFKC HARCELLVPA NCKNGEPEVA DDDAVDTSVT ATDDFDASAS SSNAYESYRN 120
121 TYTDDMDSSS IYQTSLSNVK TEETTPAE
|
| Detection Method: | |
| Confidence: | 2.85 |
| Match: | 1tbnA |
| Description: | NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.13567713176414 | bayes_pls_golite062009 |
| protein binding | 1.417409982197 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.852428113024117 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.590904037542168 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 0.433378144372842 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.36934922714234 | bayes_pls_golite062009 |
| diacylglycerol binding | 0.161261456004319 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.117036271102062 | bayes_pls_golite062009 |
|
Region A: Residues: [514-642] |
1 11 21 31 41 51
| | | | | |
1 PASKVDGVVL YDFTGEHEGV ITASEGQEFT LLEPDDGSGW VRVKIDGTDG LIPASYVKLN 60
61 DELNTSVTLD GDSSYVKALY AYTAQSDMEL SIQEGDIIQV TNRNAGNGWS EGILNGVTGQ 120
121 FPANYVTDV
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1griA |
| Description: | Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains; Growth factor receptor-bound protein 2 (GRB2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.94949685871786 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.41722924924158 | bayes_pls_golite062009 |
| actin filament binding | 3.69427077755816 | bayes_pls_golite062009 |
| binding | 2.55003340159545 | bayes_pls_golite062009 |
| protein binding | 2.35325421236395 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.44117328570973 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.371928447183203 | bayes_pls_golite062009 |
| protein binding, bridging | 0.230308623372106 | bayes_pls_golite062009 |
| molecular adaptor activity | 0.211510977251932 | bayes_pls_golite062009 |
| transporter activity | 0.0502941720831361 | bayes_pls_golite062009 |
