| Protein: | ung1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ung1.
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..3] | [320..1] |
|
|
387.0 | [0..9] | [302..9] |
|
|
386.0 | [0..20] | [302..12] |
|
|
382.0 | [0..15] | [302..12] |
|
|
382.0 | [0..28] | [302..21] |
|
|
377.0 | [0..82] | [307..10] |
|
|
377.0 | [0..83] | [308..4] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MTVLNTTDKR KADDTVNKLD GKLKQPRLDN FFKTNTSSPA LKDTQVLDNK ENNSVSKFNK 60
61 EKWAENLTPA QRKLLQLEID T
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.241 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.373 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.247 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.263 | a.28.1 | ACP-like |
| View | Download | 0.279 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
|
Region A: Residues: [82-322] |
1 11 21 31 41 51
| | | | | |
1 LESSWFDALK DEFLKPYFLN LKEFLMKEWQ SQRVFPPKED IYSWSHHTPL HKTKVILLGQ 60
61 DPYHNIGQAH GLCFSVRPGI PCPPSLVNIY KAIKIDYPDF VIPKTGYLVP WADQGILMLN 120
121 ASLTVRAHQA ASHSGKGWET FTSAVLQVAL NRNRKGLVIL AWGTPAAKRL QGLPLKAHYV 180
181 LRSVHPSPLS AHRGFFECHH FKKTNEWLEE QYGPEKCINW SAVSEQKAKI KSSELESSST 240
241 E
|
| Detection Method: | |
| Confidence: | 105.0 |
| Match: | 1eugA |
| Description: | Uracil-DNA glycosylase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA N-glycosylase activity | 5.22461096584694 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 4.68115068202636 | bayes_pls_golite062009 |
| uracil DNA N-glycosylase activity | 4.48822773983461 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.66280504021689 | bayes_pls_golite062009 |
| single-strand selective uracil DNA N-glycosylase activity | 2.14678866447561 | bayes_pls_golite062009 |
| hydrolase activity | 1.91716804176625 | bayes_pls_golite062009 |
| catalytic activity | 1.59111295908728 | bayes_pls_golite062009 |
| mismatch base pair DNA N-glycosylase activity | 1.34999321643757 | bayes_pls_golite062009 |
| binding | 1.2276262882727 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.22310035950527 | bayes_pls_golite062009 |
| nucleic acid binding | 0.901890891144085 | bayes_pls_golite062009 |
| DNA binding | 0.850361767185031 | bayes_pls_golite062009 |
| transcription regulator activity | 0.543168797464517 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.48698673207018 | bayes_pls_golite062009 |
| protein binding | 0.272261244770552 | bayes_pls_golite062009 |
