| Protein: | trp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 759 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trp1.
| Description | E-value | Query Range |
Subject Range |
|
|
696.0 | [0..1] | [759..1] |
|
|
627.0 | [0..26] | [759..1] |
|
|
607.0 | [0..7] | [758..6] |
|
|
599.0 | [0..6] | [759..3] |
|
|
593.0 | [0..6] | [757..5] |
|
|
592.0 | [0..6] | [759..5] |
|
|
590.0 | [0..12] | [759..10] |
|
|
587.0 | [0..12] | [759..10] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MSEKVDVGES VKGDASENAV KEVAERPIVM IDNYDSFTWN VVQYLSNLEK RYPIMVFRND 60
61 EITVDELEKL NPLKLVLSPG PGHPARDGGI CNEAISRFAG KIPILGVCMG LQCIFETMGG 120
121 KVDSAGEIIH GKVSKINHDG LGFYQGIPQN ISVTRYHSLA GKISSLPDCL DVTSWTENGV 180
181 IMGARHKKYA IEGVQYHPES ILSEYGKEYI QNFLNLTAGT WEEN
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1i1qB |
| Description: | Anthranilate synthase GAT subunit, TrpG |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anthranilate synthase activity | 9.07528926783927 | bayes_pls_golite062009 |
| oxo-acid-lyase activity | 7.16633518631507 | bayes_pls_golite062009 |
| 4-amino-4-deoxychorismate synthase activity | 4.48164623771604 | bayes_pls_golite062009 |
| indole-3-glycerol-phosphate synthase activity | 4.14261580175621 | bayes_pls_golite062009 |
| ligase activity | 1.70348758031146 | bayes_pls_golite062009 |
| catalytic activity | 1.30391542469987 | bayes_pls_golite062009 |
| nucleic acid binding | 0.86323855032533 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.628648036096965 | bayes_pls_golite062009 |
| binding | 0.588714599255874 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.270391651600004 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 0.0769356405014503 | bayes_pls_golite062009 |
| protein binding | 0.0152024556625711 | bayes_pls_golite062009 |
|
Region A: Residues: [225-322] |
1 11 21 31 41 51
| | | | | |
1 GIVMPTKNNA FNAAMRENSN SVSSTKIRKQ ESILEKIHAQ RLIDIAESKR KPGLSVGDLQ 60
61 TYLNLNIAPP CINFYERLKQ SKPALMAEVK RASPSKGD
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 2dplA |
| Description: | No description for 2dplA was found. |
|
Region A: Residues: [323-527] |
1 11 21 31 41 51
| | | | | |
1 IKLDANAAIQ ALTYAQVGAS VISVLTEPKW FKGSLNDLFV ARKAVEHVAN RPAILRKDFI 60
61 IDPYQIMEAR LNGADSVLLI VAMLSREQLE SLYKFSKSLG MEPLVEVNCA EEMKTAIELG 120
121 AKVIGVNNRN LHSFEVDLST TSKLAEMVPD DVILAALSGI SSPADVAHYS SQGVSAVLVG 180
181 ESLMRASDPA AFARELLNLS SSEIS
|
| Detection Method: | |
| Confidence: | 25.154902 |
| Match: | 1goxA |
| Description: | REFINED STRUCTURE OF SPINACH GLYCOLATE OXIDASE AT 2 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity | 2.15666801512485 | bayes_pls_golite062009 |
| catalytic activity | 1.94749091175302 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-CH group of donors | 1.03631792578914 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | 0.962937319088834 | bayes_pls_golite062009 |
| nucleic acid binding | 0.863669046462436 | bayes_pls_golite062009 |
| binding | 0.638680034811594 | bayes_pls_golite062009 |
| glutamate synthase activity | 0.272973710155811 | bayes_pls_golite062009 |
|
Region A: Residues: [528-759] |
1 11 21 31 41 51
| | | | | |
1 NGKKTSTPLV KVCGTRSLLA AKTIVESGGD LIGLIFVEKS KRKVDLSVAK EISHFVHTTN 60
61 RKHISPKKAV TGQSWFDHQY ENLASSPHPL LVGVFQNQPL EYIRSIIAEV NLDIVQLHGQ 120
121 EPFEWIHMLD RPVIKVFPLN SSEISRPNYH IVPLIDAYVG GESGGLGKKV DWEAASFIPV 180
181 SYVLAGGLTP KNVQDAISVS RPAVVDVSSG VETDGKQDLE KIKAFINAVK EL
|
| Detection Method: | |
| Confidence: | 101.0 |
| Match: | 1piiA |
| Description: | THREE-DIMENSIONAL STRUCTURE OF THE BIFUNCTIONAL ENZYME PHOSPHORIBOSYLANTHRANILATE ISOMERASE: INDOLEGLYCEROLPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI REFINED AT 2.0 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| indole-3-glycerol-phosphate synthase activity | 8.59736519932798 | bayes_pls_golite062009 |
| anthranilate synthase activity | 5.47492192345361 | bayes_pls_golite062009 |
| oxo-acid-lyase activity | 4.09809510052304 | bayes_pls_golite062009 |
| tryptophan synthase activity | 2.99898167480072 | bayes_pls_golite062009 |
| phosphoribosylanthranilate isomerase activity | 2.57188946638955 | bayes_pls_golite062009 |
| catalytic activity | 2.44231061702877 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 1.80077901589281 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.32677036501434 | bayes_pls_golite062009 |
| ribulose-phosphate 3-epimerase activity | 0.966175242934785 | bayes_pls_golite062009 |
| binding | 0.626392473915547 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.567370625225674 | bayes_pls_golite062009 |
| lyase activity | 0.258652421339738 | bayes_pls_golite062009 |
| protein binding | 0.014429239696785 | bayes_pls_golite062009 |
