| Protein: | skb1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 645 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for skb1.
| Description | E-value | Query Range |
Subject Range |
|
|
626.0 | [0..1] | [645..1] |
|
|
538.0 | [0..30] | [644..20] |
|
|
533.0 | [0..36] | [644..29] |
|
|
528.0 | [0..36] | [644..29] |
|
|
528.0 | [0..36] | [644..36] |
|
|
527.0 | [0..36] | [644..29] |
|
|
527.0 | [0..36] | [644..29] |
|
|
526.0 | [0..36] | [644..29] |
|
|
525.0 | [0..36] | [644..36] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MLLRDGRIPQ YSIYPLPVPP MNSKTPTLGI VCSEGTISLS LEEGFEFVGV PLSGEGLKLR 60
61 VEALAPSERL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [71-281] |
1 11 21 31 41 51
| | | | | |
1 QEFLDDEVAY HPEENVHKVV GLSSAWLELD SEDTLIADRS EEVLLKEASY ASYCGLSSII 60
61 LNGPTSPMNV MRYARAVSSA LNSTMNLKFL VQLAIESGHE DYFETWKMWD TIRSACGYHP 120
121 RLKVALELPP ACSPPIELVN RWYAEPIEMI TMSCMAFVPN PNGYPVLGRK LRAIYALYLR 180
181 LNPRILLWDN DAPEKIGDSP DYSIYMKHLF D
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [282-645] |
1 11 21 31 41 51
| | | | | |
1 SQPPAPLVED LADSYKDYLQ VPLQPLSYNL ENITYEIFER DPVKYAQYEQ AIFSALMDRD 60
61 ESSVTRIAVV GAGRGPLVDC ALRAAISSSR TVDMIALEKN PNAFSMLLMR NRQDWAGKVT 120
121 LVFGDMRTWN PDYKIDILVS ELLGSMGDNE LSPECLDGVQ HVLDEETGIC IPSSYISYVT 180
181 PIMSPKLWSE ARNMNDPNAF ERQYVVLMNS FDFLAADDEF RFQSLWSFHH PNKDSEVYTK 240
241 NLHNKRFASV RFQASSPGIL HGFAGYFEAT LYKDISLSIM PATMEAKSPD MFSWFPIYMP 300
301 IKKPMYVPEN SQLEFHMWRL TDGMRVWFEW CANAYLVLRN GSQIKLSSTE VHNISGKAFS 360
361 CNMY
|
| Detection Method: | |
| Confidence: | 73.0 |
| Match: | 1orhA |
| Description: | Structure of the Predominant Protein Arginine Methyltransferase PRMT1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein-arginine N-methyltransferase activity | 5.52520020727046 | bayes_pls_golite062009 |
| arginine N-methyltransferase activity | 5.52520020727046 | bayes_pls_golite062009 |
| protein methyltransferase activity | 5.03267617653315 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 4.4632173842967 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 4.42061797259061 | bayes_pls_golite062009 |
| histone methyltransferase activity | 4.40911163698179 | bayes_pls_golite062009 |
| protein-arginine omega-N monomethyltransferase activity | 4.39379274790202 | bayes_pls_golite062009 |
| methyltransferase activity | 4.15445027778357 | bayes_pls_golite062009 |
| N-methyltransferase activity | 4.07806017452628 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 4.07153733729662 | bayes_pls_golite062009 |
| protein-arginine omega-N asymmetric methyltransferase activity | 3.55785970363721 | bayes_pls_golite062009 |
| histone-arginine N-methyltransferase activity | 2.86617323549909 | bayes_pls_golite062009 |
| protein-arginine omega-N symmetric methyltransferase activity | 2.80855981068149 | bayes_pls_golite062009 |
| transferase activity | 2.22303238506686 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 2.18991764495147 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 1.86200407013263 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 1.79395300104934 | bayes_pls_golite062009 |
| histone methyltransferase activity (H2A-R3 specific) | 1.49229188826344 | bayes_pls_golite062009 |
| [myelin basic protein]-arginine N-methyltransferase activity | 1.49229188826344 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-R2 specific) | 1.49229188826344 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| RNA binding | 1.10729923226801 | bayes_pls_golite062009 |
| binding | 0.976078016260105 | bayes_pls_golite062009 |
| histone binding | 0.964746527369069 | bayes_pls_golite062009 |
| transcription regulator activity | 0.914549843668268 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 0.868107614027708 | bayes_pls_golite062009 |
| DNA binding | 0.86027591375666 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 0.858129308056814 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 0.858129308056814 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 0.858129308056814 | bayes_pls_golite062009 |
| mRNA methyltransferase activity | 0.73490663449605 | bayes_pls_golite062009 |
| mRNA (guanine-N7-)-methyltransferase activity | 0.73490663449605 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 0.703178429468566 | bayes_pls_golite062009 |
| nucleic acid binding | 0.616949327277483 | bayes_pls_golite062009 |
| rRNA (adenine) methyltransferase activity | 0.102141401712309 | bayes_pls_golite062009 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 0.0251895714734512 | bayes_pls_golite062009 |
