| Protein: | rga2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1275 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rga2.
| Description | E-value | Query Range |
Subject Range |
|
|
474.0 | [0..291] | [1273..125] |
|
|
422.0 | [0..39] | [1248..4] |
|
|
365.0 | [0..861] | [1270..324] |
|
|
360.0 | [0..861] | [1270..324] |
|
|
360.0 | [0..69] | [1264..44] |
|
|
349.0 | [0..861] | [1270..324] |
|
|
349.0 | [0..861] | [1270..324] |
|
|
348.0 | [0..779] | [1251..1] |
|
|
348.0 | [0..861] | [1270..324] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MVKMDVVRTT GFFLRSEPTT CRITTFAYSA EIIYFHAETT FLFEKIMKEG NELEKYSKIE 60
61 LNSEIWEDEE EEDNSGIVSQ NERLMKLVNK QREIIYELHK DLEKVKKDNT SLRMRLSKYE 120
121 STDSFPSSQP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [131-347] |
1 11 21 31 41 51
| | | | | |
1 SRANSPQSDS YSSPYEKGKL FPKISLKSSK DVPTASAHIS SSDHEKSSSV SLSALNNYNK 60
61 TTDIKARSLD RLSDMTRPKL LLNTKRSHRS SEEPGASSPV TSPILKDSQK ERIQALRNKA 120
121 IKTYSVSTES AERIDSIRSD NLSPLSLNTS SFRRPITKPT PFNSDSNISI DPKDNNSNKQ 180
181 DHFAEIEDEL RQQFLDIKVG RANASSPRRK SISIVKP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [348-450] |
1 11 21 31 41 51
| | | | | |
1 HGISSPKHST NNLSSKSGKF HSDFRVVSEN VLLQARSETN SPIIENKEAN NFLAPTSNVP 60
61 AYSTPARPTE SPPPPPISSS STTPRPDDKP SLPPRGLSED NDS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [451-561] |
1 11 21 31 41 51
| | | | | |
1 LSLQKTGSSD TRRSSFSTLK IPDSDICFTR RRSDSNRTWT VIDPHHSQSF DNDILAEIPT 60
61 SKLDNSSQKS PGKLSSKGLL NSFSPISPFS KSKSHNHHPS SQVEKSTSNS K
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [562-642] |
1 11 21 31 41 51
| | | | | |
1 GSMLPLDTLY NNKLSFRLDE SLVRYLRFEL MKTSLASLSP DFDCIGLQFV VGVSASSHLA 60
61 SQWKDEVWSF TRSIGECRSF A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [643-721] |
1 11 21 31 41 51
| | | | | |
1 TSFVLDIGAP PFPTLDWFTN DSSVIQNELL RRSVDTYFRY IFQTDLKLEQ RIKLLEFLSS 60
61 DTLREYLHDV FFLPPEHAQ
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1xtnA |
| Description: | crystal structure of CISK-PX domain with sulfates |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.39207685184342 | bayes_pls_golite062009 |
| protein binding | 1.80677432725077 | bayes_pls_golite062009 |
|
Region A: Residues: [722-839] |
1 11 21 31 41 51
| | | | | |
1 KEGVLLKYIE NSGLVSRYFY LKDNILYFAE NRNSPVLGTI HLKDAQVNRY NANLPIFSII 60
61 DPPHEFLTGE NYQSAFVIQE KQTETRTGTA TVHVLLARDV EDQKSWLRAI LRQVPGST
|
| Detection Method: | |
| Confidence: | 31.154902 |
| Match: | 1u2bA |
| Description: | Triglycine variant of the Grp1 Pleckstrin Homology Domain unliganded |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [840-1275] |
1 11 21 31 41 51
| | | | | |
1 SPLNASPFSV LSSDFPGSSR YRDQSSPIRF YGKADSRPVS QEAILSQDIS SSPSPVLPPS 60
61 ENVASYADDS LVSNLTMSPK LRDSMEQVPL ENHREFEISD RVSELSFDSS TGSVLEIADT 120
121 RRNQDAPEKH VPVIEIQSSR PSLEKTDQST PVELLIDSHS QNSQNEEKRS RMKFWAFPHH 180
181 KAENYEQISD TNIPVIETNV MLSPSSTTSA EPLQKHIVRK SGIFGLPLNE AVNISTQFND 240
241 SGLPIVVYRC IEYLESCRAE KEEGIYRLSG SASTIKHLKE QFNEGVDYDL LSSDEEFDVH 300
301 VIAGLLKLYL RNLPTNLLDT SMHKLFELLP NVPNDSAALG ELCDVISKLP PENFALLDSL 360
361 LHHLRRIIAF EKVNKMNIRN VCIVFSPTLN IPSDIFMMLI LNYDHIFTDI SRQTNGAQNE 420
421 SDSDVSDDNG EDNEFF
|
| Detection Method: | |
| Confidence: | 80.522879 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Rho GTPase activator activity | 4.45527136122296 | bayes_pls_golite062009 |
| Rac GTPase activator activity | 4.36872878750284 | bayes_pls_golite062009 |
| GTPase regulator activity | 2.61511682702035 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 2.59032629780818 | bayes_pls_golite062009 |
| binding | 2.15139804299723 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 1.96768465804738 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.87657402052119 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.85037053674911 | bayes_pls_golite062009 |
| protein binding | 1.29100556128076 | bayes_pls_golite062009 |
| diacylglycerol binding | 1.02792245495259 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 0.982302027631241 | bayes_pls_golite062009 |
| Rho guanyl-nucleotide exchange factor activity | 0.890065668535699 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 0.874385217290396 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.690843185161327 | bayes_pls_golite062009 |
| GTPase activator activity | 0.635863123494771 | bayes_pls_golite062009 |
| kinase activity | 0.411929190066223 | bayes_pls_golite062009 |
| enzyme activator activity | 0.223298136783465 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.164035505126366 | bayes_pls_golite062009 |
| Rho GTPase binding | 0.150587174126097 | bayes_pls_golite062009 |
