| Protein: | res2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 657 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for res2.
| Description | E-value | Query Range |
Subject Range |
|
|
434.0 | [0..7] | [650..77] |
|
|
433.0 | [0..7] | [650..77] |
|
|
432.0 | [0..3] | [595..930] |
|
|
428.0 | [0..7] | [652..67] |
|
|
427.0 | [0..7] | [652..67] |
|
|
427.0 | [0..4] | [652..19] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MAPRSSAVHV AVYSGVEVYE CFIKGVSVMR RRRDSWLNAT QILKVADFDK PQRTRVLERQ 60
61 VQIGAHEKVQ GGYGKYQGTW VPFQRGVDLA TKYKVDGIMS PILSLDIDEG KAIAPKKKQT 120
121 KQKKPSVRGR RGRKPSSLSS STLHSVNEK
|
| Detection Method: |  |
| Confidence: | 8.39794 |
| Match: | 1mb1A |
| Description: | MBP1 FROM SACCHAROMYCES CEREVISIAE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.36949648004482 | bayes_pls_golite062009 |
| DNA binding | 4.06494205639151 | bayes_pls_golite062009 |
| nucleic acid binding | 3.98559547948274 | bayes_pls_golite062009 |
| transcription factor activity | 3.87642218322379 | bayes_pls_golite062009 |
| binding | 2.79149251200147 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.09766190372909 | bayes_pls_golite062009 |
| transcription repressor activity | 0.838109968340069 | bayes_pls_golite062009 |
| protein binding | 0.504276536503861 | bayes_pls_golite062009 |
|
Region A: Residues: [150-657] |
1 11 21 31 41 51
| | | | | |
1 QPNSSISPTI ESSMNKVNLP GAEEQVSATP LPASPNALLS PNDNTIKPVE ELGMLEAPLD 60
61 KYEESLLDFF LHPEEGRIPS FLYSPPPDFQ VNSVIDDDGH TSLHWACSMG HIEMIKLLLR 120
121 ANADIGVCNR LSQTPLMRSV IFTNNYDCQT FGQVLELLQS TIYAVDTNGQ SIFHHIVQST 180
181 STPSKVAAAK YYLDCILEKL ISIQPFENVV RLVNLQDSNG DTSLLIAARN GAMDCVNSLL 240
241 SYNANPSIPN RQRRTASEYL LEADKKPHSL LQSNSNASHS AFSFSGISPA IISPSCSSHA 300
301 FVKAIPSISS KFSQLAEEYE SQLREKEEDL IRANRLKQDT LNEISRTYQE LTFLQKNNPT 360
361 YSQSMENLIR EAQETYQQLS KRLLIWLEAR QIFDLERSLK PHTSLSISFP SDFLKKEDGL 420
421 SLNNDFKKPA CNNVTNSDEY EQLINKLTSL QASRKKDTLY IRKLYEELGI DDTVNSYRRL 480
481 IAMSCGINPE DLSLEILDAV EEALTREK
|
| Detection Method: | |
| Confidence: | 72.09691 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.60916417202222 | bayes_pls_golite062009 |
| transcription regulator activity | 2.37103377984038 | bayes_pls_golite062009 |
| nucleic acid binding | 1.8957142857582 | bayes_pls_golite062009 |
| DNA binding | 1.78305438715057 | bayes_pls_golite062009 |
| protein binding | 1.64872738860757 | bayes_pls_golite062009 |
| transcription factor activity | 1.2667825651547 | bayes_pls_golite062009 |
| transcription factor binding | 1.06366405671195 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.56201598804914 | bayes_pls_golite062009 |
| transcription activator activity | 0.312682802870618 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 0.0462605323512499 | bayes_pls_golite062009 |
