| Protein: | shm2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for shm2.
| Description | E-value | Query Range |
Subject Range |
|
|
359.0 | [0..1] | [472..1] |
|
|
358.0 | [0..1] | [472..1] |
|
|
358.0 | [0..1] | [472..1] |
|
|
357.0 | [0..3] | [469..41] |
|
|
356.0 | [0..1] | [472..1] |
|
|
355.0 | [0..4] | [471..11] |
|
|
354.0 | [0..3] | [469..40] |
|
|
354.0 | [0..3] | [469..41] |
|
|
354.0 | [0..1] | [472..1] |
|
Region A: Residues: [1-472] |
1 11 21 31 41 51
| | | | | |
1 MKCSNKVLTI IKLLKAPLAE CDPTVYKILE SEKSRQKESI ALIASENFTS RAVMDALGSI 60
61 MQNKYSEGYP GARYYGGNEF IDQAERLCQT RALEAFHLDG EKWGVNVQPH SGSPANLQAY 120
121 QAVMKPHDRL MGLDLPHGGH LSHGFSTPQK AISAVSTYFS TMPYNVNKET GIIDYDSLEK 180
181 AAIQFRPKVI VAGASAYARL VDYKRMRKIT EMCNAYLLCD MAHISGLVAA GVIPSPFEYA 240
241 DIVTTTTHKS LRGPRGAMIF YRKGTRSHDK RGNPILYELE DKINFSVFPG HQGGPHNHTI 300
301 TALAVALGQA KTPEFYQYQK DVLSNAKAMA NAFITRGYKL VSGGTDTHLV LVDLTDKGVD 360
361 GARVERILEL VNISANKNTV PGDKSALIPR GLRLGTPACT TRGFDEKDFE RVVELIDEVV 420
421 SLTKKINEAA LKEGKSKFRD FKAYVGDGSK FSEIAKLKKE VITWAGKFDF PV
|
| Detection Method: |  |
| Confidence: | 90.522879 |
| Match: | 2a7vA |
| Description: | Human mitochondrial serine hydroxymethyltransferase 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-aspartate:2-oxoglutarate aminotransferase activity | 3.359406422625 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 3.2128372762799 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 3.2128372762799 | bayes_pls_golite062009 |
| transferase activity | 2.59075614411581 | bayes_pls_golite062009 |
| 5-aminolevulinate synthase activity | 2.47911083054773 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 2.1692959843619 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67701710033155 | bayes_pls_golite062009 |
| DNA binding | 1.4774443071095 | bayes_pls_golite062009 |
| nucleic acid binding | 1.39741122443159 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 1.19150094103499 | bayes_pls_golite062009 |
| transcription factor activity | 1.15775909410582 | bayes_pls_golite062009 |
| N-succinyltransferase activity | 1.14675852378654 | bayes_pls_golite062009 |
| binding | 1.09053123792737 | bayes_pls_golite062009 |
| structural molecule activity | 0.754675308623467 | bayes_pls_golite062009 |
| methyltransferase activity | 0.681623261233707 | bayes_pls_golite062009 |
| vitamin binding | 0.66463470119531 | bayes_pls_golite062009 |
| protein binding | 0.613130945854863 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.60304280865376 | bayes_pls_golite062009 |
| L-allo-threonine aldolase activity | 0.500744432308415 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
