| Protein: | SPAC13G6.06c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1017 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13G6.06c.
| Description | E-value | Query Range |
Subject Range |
|
|
775.0 | [0..6] | [1016..30] |
|
|
760.0 | [0..7] | [1015..39] |
|
|
755.0 | [0..5] | [1015..23] |
|
|
755.0 | [0..5] | [1015..23] |
|
|
753.0 | [0..5] | [1015..23] |
|
Region A: Residues: [1-477] |
1 11 21 31 41 51
| | | | | |
1 MFRACSKLQY HGVNTSLSRH LFLAKRNLSI SSACLEAKNS QKFPALDTFE PRHIGPSKTD 60
61 QQYQLESLGY KDFDSFLKDV IPDSVRTPES QLMAFGSVNP NEKNPPVNYS ESEFTTLANN 120
121 VANQNKLIKS FIGMGYYNVK LPAAIQRNVL ENPEWYTQYT PYQAEISQGR LESMMNYQTM 180
181 IADLTGLSIS NASLLDEGTA AGEAMVMLMA NDKKKRKTFL VDKNIYPNTL SVLRTRASGF 240
241 GIKIELDNIT PELITKSAKH VFGIFVQYPA ADGSIFDYGH LAATARSFNM HVVAATDLLA 300
301 LTILKSPGEW GADVAVGSTQ RFGLPMGYGG PHAGFFACSE EFKRKIPGRL IGLSKDRLEN 360
361 PAYRLALQTR EQHIRREKAT SNICTAQALL ANMSAFYAIY HGPNGLQEIA NRIYASTSFL 420
421 KSALESSGYK IVNKSHFFDT LTIEVESADK VLAKALDHGY NLRKVDDSHV GLSLDET
|
| Detection Method: |  |
| Confidence: | 61.154902 |
| Match: | 1wytA |
| Description: | Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycine dehydrogenase (decarboxylating) activity | 8.00572280567771 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 8.00572280567771 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors | 3.14486270422678 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity | 1.44093490824786 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| methyltransferase activity | 0.681623261233707 | bayes_pls_golite062009 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 0.619695949258279 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.60304280865376 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 0.234399054481664 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
|
Region A: Residues: [478-529] |
1 11 21 31 41 51
| | | | | |
1 VCDKDIQALF SIFNINKSVD QYYMEIATSE PNGNSASTVD NLSICSLPEN FR
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 2qmaA |
| Description: | No description for 2qmaA was found. |
|
Region A: Residues: [530-1017] |
1 11 21 31 41 51
| | | | | |
1 RTTLYLQHPV FNRYHSETEL MRYIHHLQSK DLSLAHAMTP LGSCTMKLNA VTEMMPITNP 60
61 LFANIHPYVP EEQAKGYRHV IEDLQLMLTT ITGFDAACFQ PNSGAAGEYT GLSVIRAYQR 120
121 SIGQGHRNIC LIPVSAHGTN PASAAMAGFT VIPVKCLNNG YLDMQDLKEK ASKHADKLAA 180
181 FMVTYPSTFG IFEPDVKEAL EVIHEHGGQV YFDGANMNAM VGLCKAGDIG ADVCHLNLHK 240
241 TFCIPHGGGG PGVGPICVKK HLADFLPSHP VVSCGGKNGI TSVSSSPFGS AGILPISWAY 300
301 MRMMGLAGLR DASKAALLNA NYMAKRLSSH YKLVYTNKNN LCAHEFILDA REFKATAGVD 360
361 ATDIAKRLQD YSFHAPTLSW PIANTLMIEP TESESMYEMD RFCDALISIR QEIREIEEGL 420
421 QPKDNNLLVN APHPQKDIAS EKWDRPYTRE RAVYPVPLLK ERKFWPSVAR LDDAYGDKNL 480
481 FCTCSPVV
|
| Detection Method: | |
| Confidence: | 58.09691 |
| Match: | 1wytB |
| Description: | Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycine dehydrogenase (decarboxylating) activity | 8.00572280567771 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 8.00572280567771 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors | 3.14486270422678 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity | 1.44093490824786 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| methyltransferase activity | 0.681623261233707 | bayes_pls_golite062009 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 0.619695949258279 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.60304280865376 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 0.234399054481664 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
