| Protein: | fep1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fep1.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..1] | [564..1] |
|
|
190.0 | [0..12] | [513..599] |
|
|
174.0 | [0..3] | [510..54] |
|
|
170.0 | [0..77] | [465..1401] |
|
|
160.0 | [0..77] | [465..1479] |
|
|
159.0 | [0..2] | [506..155] |
|
|
158.0 | [0..15] | [494..468] |
|
|
156.0 | [0..39] | [502..46] |
|
|
155.0 | [0..77] | [465..1479] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MAAKPAPFGQ SCSNCHKTTT SLWRRGPDNS LLCNACGLYQ KHRKHARPVK SEDLKDISPL 60
61 IQQVC
|
| Detection Method: |  |
| Confidence: | 2.76 |
| Match: | 6gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.84932768708444 | bayes_pls_golite062009 |
| DNA binding | 3.45124926204188 | bayes_pls_golite062009 |
| nucleic acid binding | 3.34875987514951 | bayes_pls_golite062009 |
| binding | 2.8684204787273 | bayes_pls_golite062009 |
| transcription factor activity | 2.74592237402384 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.23212813739998 | bayes_pls_golite062009 |
| transcription activator activity | 1.45965791386122 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.44741411126911 | bayes_pls_golite062009 |
| protein binding | 1.30321965120678 | bayes_pls_golite062009 |
| transcription factor binding | 1.22761682002 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.1269808729848 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.11015147180927 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.02819346233483 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.987907067926876 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.551724917261005 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.449959641856445 | bayes_pls_golite062009 |
| transcription repressor activity | 0.199267983374872 | bayes_pls_golite062009 |
| catalytic activity | 0.133319360419662 | bayes_pls_golite062009 |
|
Region A: Residues: [66-146] |
1 11 21 31 41 51
| | | | | |
1 KNGTCAGDGF CNGTGGSASC TGCPALNNRI RSLNASKSQS GRKSLSPNPS SVPSSTETKA 60
61 SPTPLESKPQ IVSDTTTETS N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [147-247] |
1 11 21 31 41 51
| | | | | |
1 GTSRRRSSHN QHEDSSPPHE PSVTFCQNCA TTNTPLWRRD ESGNPICNAC GLYYKIHGVH 60
61 RPVTMKKAII KRRKRLVFNG NANESQHNLK RMSSGDSGSS V
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.00967542385368 | bayes_pls_golite062009 |
| DNA binding | 3.60745514727532 | bayes_pls_golite062009 |
| nucleic acid binding | 3.47256374293954 | bayes_pls_golite062009 |
| binding | 2.96409924710655 | bayes_pls_golite062009 |
| transcription factor activity | 2.90769972671972 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.40923942043513 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.62841402245495 | bayes_pls_golite062009 |
| transcription activator activity | 1.62405765585032 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.49515149729803 | bayes_pls_golite062009 |
| protein binding | 1.39455913713025 | bayes_pls_golite062009 |
| transcription factor binding | 1.38523780690867 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.26452462867497 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.10242633521642 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.979635034577337 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.68943696300126 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58115018700114 | bayes_pls_golite062009 |
| transcription repressor activity | 0.256420113528322 | bayes_pls_golite062009 |
| receptor activity | 0.126253365586995 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
|
Region A: Residues: [248-330] |
1 11 21 31 41 51
| | | | | |
1 KQQSTRDGPF SKSFPNGNGH ASGNSGEGLA EHGMNTGVLP PASTFPSYNS NFTGFLPSSF 60
61 NPSPLMTLSR LAAGEPDNNG KVY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [331-495] |
1 11 21 31 41 51
| | | | | |
1 YSYGPTQEQS ILPLPENKHE GLPPYQNEYV PNGIRANQVV YPGQLVAVGN DSSKQLSEST 60
61 TSNTDNNGVA TANQSNPLGM KFHLPPILPV GESVCLPPRT SAKPRIAEGI ASLLNPEEPP 120
121 SNSDKQPSMS NGPKSEVSPS QSQQAPLIQS STSPVSLQFP PEVQG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [496-564] |
1 11 21 31 41 51
| | | | | |
1 SNVDKRNYAL NVLSQLRSQH DLMIQELHNL NQHIQQIDEW LRSSDNENMA SEHIKSSTPA 60
61 VVASGALQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.824 | a.112.1 | Description not found. |
