| Protein: | tif224 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 467 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tif224.
| Description | E-value | Query Range |
Subject Range |
|
|
332.0 | [0..12] | [460..55] |
|
|
328.0 | [0..9] | [460..40] |
|
|
327.0 | [0..9] | [460..53] |
|
|
326.0 | [0..12] | [460..59] |
|
|
326.0 | [0..13] | [460..78] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MGFSAEQAKK DGKDQSPVSE SSSVGGTSPA TASSVVSPNE PKLSGKEAKA LKKARKQASR 60
61 RAKAEAAAAN NPPGVSEEKK VAIPNKNSNQ QKKASKQNPQ NSPETDANLQ EKKIFEEKQV 120
121 SIFSHLDW
|
| Detection Method: |  |
| Confidence: | 18.522879 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [129-467] |
1 11 21 31 41 51
| | | | | |
1 RRRRTTENIP KDIHPAVIRL GLKLANYKIF GSNQRCIDLL KTFKIVIQDY QTPYGTTLSR 60
61 HLTTHINSQI AYLVSTRPLS ISMGNAIRFL KLEISVLDID LTDDEGKELL LEKIDSYIRD 120
121 RIIIAGQVIV QAATEKIQDG DVILTYLHSS TVNDVLIHAK NVGKKFRVVV VDSRPEFEGR 180
181 VCLKLLTEHG IECTYVMISA LSYIMQEVTK IFLGGHAMLS NGALYSRAGT SLISLLGHES 240
241 NVPVIACCES YKFTERIQLD SLVYNELAPG DQLVNMGVDD FEEKPGVLAN WKSVKNLKLL 300
301 SLKYDVTPPR LITVCVCEMG LLPSTSVPAI INEFKQVYA
|
| Detection Method: | |
| Confidence: | 87.522879 |
| Match: | 1t9kA |
| Description: | X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima] |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 10.1099993541596 | bayes_pls_golite062009 |
| translation regulator activity | 5.74669335554405 | bayes_pls_golite062009 |
| nucleic acid binding | 2.17718456512191 | bayes_pls_golite062009 |
| transcription regulator activity | 1.9283980201455 | bayes_pls_golite062009 |
| DNA binding | 1.55389679363348 | bayes_pls_golite062009 |
| binding | 1.53908996868286 | bayes_pls_golite062009 |
| catalytic activity | 1.31732715713197 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.09424756417577 | bayes_pls_golite062009 |
| transcription repressor activity | 1.03828732072006 | bayes_pls_golite062009 |
| transcription factor activity | 0.995059566132783 | bayes_pls_golite062009 |
| sugar binding | 0.319281682893106 | bayes_pls_golite062009 |
| protein binding | 0.0293610121675921 | bayes_pls_golite062009 |
