| Protein: | cdr2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 775 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdr2.
| Description | E-value | Query Range |
Subject Range |
|
|
484.0 | [0..7] | [733..60] |
|
|
482.0 | [0..7] | [733..53] |
|
|
481.0 | [0..7] | [733..61] |
|
|
481.0 | [0..7] | [733..41] |
|
|
480.0 | [0..7] | [733..53] |
|
|
480.0 | [0..7] | [733..53] |
|
|
479.0 | [0..7] | [733..53] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MSTISEVGPW ELGLSLGSGG PNSSRLAKHR ETGQLAVVKP IVGWSELTSS QQARIEGELV 60
61 LLRLIEHPNV LQLIDVISAQ EQLFVVVEYM PGGELFDCML RKGSFTEQDT AKFLWQILCG 120
121 LEYCHKLHIC HRDLKPENLY LDAHGSIKIG EFGMASIQQP GKLLQTSCGS PHYASPEIIM 180
181 GRSYDGCASD IWSCGIIFFA LLTGKLPFDD DNIRSLLLKV CQGQFEMPSN ISPQAQHLLY 240
241 RMLDVDSSTR ITMEQIREHP FLSCFVHPNI SIPIISAPIQ PIDPLIVQHL SLVFRCSDDP 300
301 MPLYEKLASQ SPLVEKTLYT LLSRHL
|
| Detection Method: |  |
| Confidence: | 82.09691 |
| Match: | 1zmuA |
| Description: | Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-535] |
1 11 21 31 41 51
| | | | | |
1 HPPSSAAVDR NRAVVDDLLG TAASNGQQMD EEEIEQAINI PTLAPYPISY AAESVPRPAT 60
61 SASPFLTPVT TSGTFNYSFN ATNPQSILQR PATTSSAVPQ LPKSVTPGLA YPHDSSMLSS 120
121 NYRPPSALSP RNFNVSINDP EVQLSRRATS LDMSNDFRMN ENDPSIVGNL AASNFPTGMG 180
181 PPRKRVTSRM SEHTGNRVVS FPRGSAFNP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [536-622] |
1 11 21 31 41 51
| | | | | |
1 RVTRFNVGNE QFSNNIDNNN YNQPYANATM NNSRRLRTPS GERSMRADLS QSPASYDSLN 60
61 VPKHRRRQSL FSPSSTKKKL SGSPFQP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [623-775] |
1 11 21 31 41 51
| | | | | |
1 KRSFLRRLFS SEPSCKCVYA SLVASELEHE ILEVLRRWQL LGIGIADIIY DSVSASISAR 60
61 IKRQNSLNLK PVRFRISVLA EFFGSQAVFV LESGSSTTFD HLATEFQLIF EDKGFLDNLE 120
121 LSYFQASASR PVSRMSVSSS PFAVFRQRQS VQS
|
| Detection Method: | |
| Confidence: | 36.0 |
| Match: | 1ul7A |
| Description: | Solution structure of kinase associated domain 1 of mouse MAP/microtubule affinity-regulating kinase 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein kinase activity | 4.05475891009228 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 3.7974128326421 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 3.59230737331367 | bayes_pls_golite062009 |
| kinase activity | 3.41737435609334 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 3.2342722637405 | bayes_pls_golite062009 |
| binding | 2.41732321506551 | bayes_pls_golite062009 |
| transferase activity | 2.04713540681686 | bayes_pls_golite062009 |
| ATP binding | 1.44435058039859 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.41005152726625 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.38971642420542 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.16863558166547 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.16859376715941 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.15633908642115 | bayes_pls_golite062009 |
| nucleotide binding | 1.14964488472581 | bayes_pls_golite062009 |
| catalytic activity | 0.836142537655721 | bayes_pls_golite062009 |
| protein binding | 0.704339182896017 | bayes_pls_golite062009 |
| AMP-activated protein kinase activity | 0.496765880715405 | bayes_pls_golite062009 |
| magnesium ion binding | 0.439688030503848 | bayes_pls_golite062009 |
