| Protein: | app1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 857 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for app1.
| Description | E-value | Query Range |
Subject Range |
|
|
254.0 | [0..61] | [813..609] |
|
|
236.0 | [0..105] | [761..1361] |
|
|
228.0 | [0..68] | [749..181] |
|
|
226.0 | [0..59] | [799..677] |
|
|
222.0 | [0..105] | [794..755] |
|
|
216.0 | [0..94] | [775..60] |
|
|
208.0 | [0..251] | [857..22] |
|
|
208.0 | [0..186] | [857..9] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MSFQLDTSTH GAEIRNVYEK VLSGADDCSW AIFGYEKGQG NILKVVASGN DNDEFLDEFD 60
61 ENAVLFGFLR VKDVNTGLNK FVLVCWCGEA AARKGLFSIH MATVSNLLKG YHVQITGRES 120
121 SDLNMDDIIR RVADASGSK
|
| Detection Method: |  |
| Confidence: | 26.522879 |
| Match: | 1x67A |
| Description: | Solution structure of the cofilin homology domain of HIP-55 (drebrin-like protein) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [140-284] |
1 11 21 31 41 51
| | | | | |
1 YSVHTSNSTP QSKHNAFYDA SQTFGSTAKV APAPAPSTKT PLANISKPVV QAQKDSKDNS 60
61 WDDSSKQSNT QTANTTSNLR VPVNASWSDA GRKEKSQENK PKPTPFGSGG PSKPTPFESH 120
121 GPAKQISVQP SEHPKPSIST TTTGS
|
| Detection Method: | |
| Confidence: | 1.09 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [285-357] |
1 11 21 31 41 51
| | | | | |
1 SYRSAESSHA PTTPDHFKLT PLTKLEPQPP SGSPSKKPVS ELEELHTAGN VNLSARRALF 60
61 EKKESSTKNV ENP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [358-487] |
1 11 21 31 41 51
| | | | | |
1 VSHHLKSPVR TSFPPASTTA SKQDSPSTVP VDKQETAKPI NKQVSSNETS AQEEPRESVA 60
61 ALRARFAKAN VSENNDPPTF PKTAAKISSF NSKAGTSFAK PRPFTNNPNP ISAPEKPTSG 120
121 ESLSLNPPPA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [488-634] |
1 11 21 31 41 51
| | | | | |
1 MPKVFPERDI SSASQKAAQP SVITPSVPQP PAAPVVPEAP SVHQPPAAPV APEVPSAPQR 60
61 PAAPVVPEAP SVPQRPAVPV VPEALSVPQP PVAPVAPEVP SVPQPPVAPV VPEAPSVPQP 120
121 PVAPVAPEVP SVPQRPAVPV VPEAPSV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [635-737] |
1 11 21 31 41 51
| | | | | |
1 PQPPAAPVVP EVPSVPQRPA VPVVPEAPSV PQPPAAPVVP EVPSVPQPPA VPVVPEAGQL 60
61 NEPVVPPLPP HDETQEPQVG GDVKATEHTQ PTKTPAIVIY DYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [738-857] |
1 11 21 31 41 51
| | | | | |
1 PEEENEIELV ENEQIQILEF VDDGWWLGEN SKGQQGLFPS NYVEITGPNE TANNPPAEPQ 60
61 AGGPGKSVKA IYDYQAQEDN ELSFFEDEII ANVDCVDPNW WEGECHGHRG LFPSNYVEEI 120
121
|
| Detection Method: | |
| Confidence: | 19.09691 |
| Match: | 1uecA |
| Description: | p47pox (neutrophil cytosolic factor 1) |
Matching Structure (courtesy of the PDB): |
|
