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Protein Overview: app1

General Information:
Name(s) found: app1 / SPAPJ760.02c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • App1 protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 857 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    actin cortical patch [IDALink to PubMed article]
    Biological Process: actin cytoskeleton organization [ICLink to PubMed article]
    Molecular Function: actin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFQLDTSTH GAEIRNVYEK VLSGADDCSW AIFGYEKGQG NILKVVASGN DNDEFLDEFD  60
   61 ENAVLFGFLR VKDVNTGLNK FVLVCWCGEA AARKGLFSIH MATVSNLLKG YHVQITGRES 120
  121 SDLNMDDIIR RVADASGSKY SVHTSNSTPQ SKHNAFYDAS QTFGSTAKVA PAPAPSTKTP 180
  181 LANISKPVVQ AQKDSKDNSW DDSSKQSNTQ TANTTSNLRV PVNASWSDAG RKEKSQENKP 240
  241 KPTPFGSGGP SKPTPFESHG PAKQISVQPS EHPKPSISTT TTGSSYRSAE SSHAPTTPDH 300
  301 FKLTPLTKLE PQPPSGSPSK KPVSELEELH TAGNVNLSAR RALFEKKESS TKNVENPVSH 360
  361 HLKSPVRTSF PPASTTASKQ DSPSTVPVDK QETAKPINKQ VSSNETSAQE EPRESVAALR 420
  421 ARFAKANVSE NNDPPTFPKT AAKISSFNSK AGTSFAKPRP FTNNPNPISA PEKPTSGESL 480
  481 SLNPPPAMPK VFPERDISSA SQKAAQPSVI TPSVPQPPAA PVVPEAPSVH QPPAAPVAPE 540
  541 VPSAPQRPAA PVVPEAPSVP QRPAVPVVPE ALSVPQPPVA PVAPEVPSVP QPPVAPVVPE 600
  601 APSVPQPPVA PVAPEVPSVP QRPAVPVVPE APSVPQPPAA PVVPEVPSVP QRPAVPVVPE 660
  661 APSVPQPPAA PVVPEVPSVP QPPAVPVVPE AGQLNEPVVP PLPPHDETQE PQVGGDVKAT 720
  721 EHTQPTKTPA IVIYDYSPEE ENEIELVENE QIQILEFVDD GWWLGENSKG QQGLFPSNYV 780
  781 EITGPNETAN NPPAEPQAGG PGKSVKAIYD YQAQEDNELS FFEDEIIANV DCVDPNWWEG 840
  841 ECHGHRGLFP SNYVEEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] PSI-BLAST 26.522879 Solution structure of the cofilin homology domain of HIP-55 (drebrin-like protein)
    2 View Details [140..284] FFAS03 1.09 No description for 2j63A was found.
    3 View Details [285..357] deduced N/A No confident structure predictions are available.
    4 View Details [358..487] MSA 5.266995 View MSA. No confident structure predictions are available.
    5 View Details [488..634] MSA 2.259994 View MSA. No confident structure predictions are available.
    6 View Details [635..737] deduced N/A No confident structure predictions are available.
    7 View Details [738..857] PSI-BLAST 19.09691 p47pox (neutrophil cytosolic factor 1)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle