| Protein: | Taf8-PA |
| Organism: | Drosophila melanogaster |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Taf8-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
359.0 | [0..1] | [328..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MEKVEAVTVS NVDPYRRILN KVVSQLLLDK GAGQASNHSL ETLTQMLQAL IWEIGNSAHN 60
61 YCELSGRTMP TVGDVSLALI NMGISISNLD PYMRKETHVP IPLPPQQTQQ RPLSLLQAGI 120
121 KAPHPHYVPS YFPPMPDPHA YIRTPTHK
|
| Detection Method: |  |
| Confidence: | 12.221849 |
| Match: | 1tafA |
| Description: | TAF(II)42 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 9.25279783093877 | bayes_pls_golite062009 |
| DNA binding | 4.49118409263799 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35201412176948 | bayes_pls_golite062009 |
| transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
| transcription initiation factor activity | 3.96621818094279 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.28941584139552 | bayes_pls_golite062009 |
| binding | 3.27510691458843 | bayes_pls_golite062009 |
| transcription activator activity | 2.58408368884371 | bayes_pls_golite062009 |
| transcription factor activity | 2.51581622888695 | bayes_pls_golite062009 |
| protein binding | 2.1291876005999 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.18653213156155 | bayes_pls_golite062009 |
| transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.1297723528047 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.10331930589736 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
| transcription repressor activity | 0.72554769377984 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0792897588268993 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0736756545988504 | bayes_pls_golite062009 |
|
Region A: Residues: [149-328] |
1 11 21 31 41 51
| | | | | |
1 QPVTEYEAIR EKAACQKRDI EKALTKFLCK TTETNNLFPT EDNMFPLIAC KPAFPPYAAA 60
61 LNPTDQVFDF EELEYHYLVA NRTEDEPSKD DGEEGDSENE EMDGDKSKEE KPELDIKPNS 120
121 NTNKAILENP NIDNPYLRAA TLPKRSKNCP TPGTMPSRSL ATTAPTIRTP STLEITKTNL 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
